Conserved Protein Domain Family
AARP2CN

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pfam08142: AARP2CN 
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AARP2CN (NUC121) domain
This domain is the central domain of AARP2. It is weakly similar to the GTP-binding domain of elongation factor TU.
Statistics
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PSSM-Id: 311867
View PSSM: pfam08142
Aligned: 206 rows
Threshold Bit Score: 67.1416
Threshold Setting Gi: 224009067
Created: 23-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5IW7_A        211 DALNVLRTLCQRLp-RS-INWRDNRGYVVADFVDFVETSPDS----------------------GDLVIEGTVRG-IGF- 264
gi 298713556  234 nSSLLARTLSTTAp-RR-IHWRAIRSYLLADSTEVVPESGSRgd------------------kfGTLHVRGYIRG-RPL- 291
gi 196005899  227 DAQRILRIAATTKl-QK-ITYREIRPYLLAETVEFNECDSSd---------------------nGVLQVTGYLRG-HSL- 281
gi 290992687  263 EMKQILLRLNSLTp-KT-IYWRENHPYMIVENLEFIKKDQSEinelsd-----------ensnnGTLVIRGYLRG-KPA- 327
gi 145346447  120 EFTELVRQTVELRg-ET-PRWRGQRPYVLAHRREIIPDVSDDr--------------------fATVVVEGYVRG-VPA- 175
gi 569380137  358 DMPQLFRFLDTCSy-SD-TEWREKRNYLLGENVEFVAHPNDAk--------------------hGTLKVTGFLRGkRPL- 414
gi 302808814  236 EAQQMLRHISEQRp-SH-LQWRSQRPYVMAEQLAFEADSQSPs--------------------vGTLRLSGYVRE-QSL- 291
gi 575477340  230 ECLSALRYITTQRp-KQ-VVWRERHPYLVADQLSFQSNTLDEt--------------------hGTLCVTGYLRG-NKL- 285
gi 301117030  242 vpgQLSRVLITLSp-KV-IHWREARSYMLATTATFVPGSEAQndkg---------------eqvGELQVNGYLRG-KPL- 302
gi 224009067  437 sISALIRTLCTISasGPsWVADASRPYLITDGTAAAATSSTSkgnssnadasakppavqynpgnQELKLTGYIRSgKSTt 516
                          90       100
                  ....*....|....*....|....
5IW7_A        265 --NANRLVHIPDFGDFQLNKIEKI 286
gi 298713556  292 --DVNQVVHVGDAGHFGLRQINSA 313
gi 196005899  282 --SANNLVYIPGSGEYQLLKITAP 303
gi 290992687  328 --SPNQLFHLVNYGTYQLDKIvle 349
gi 145346447  176 --TASQLWHLPGVGDFPVVKIESI 197
gi 569380137  415 --DINLPIHITGVGDFLMEKIEEV 436
gi 302808814  292 --SVNKLIHISGIGDFQLEKMEIL 313
gi 575477340  286 --DVNRLVHIPNYGDFQMSIITSr 307
gi 301117030  303 --SVNQLIHITDVGTFQMSRITRA 324
gi 224009067  517 pwNVNQLVHVPHLGTYAVKNIVla 540
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