4WZW


Conserved Protein Domain Family
CPL

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pfam08144: CPL 
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CPL (NUC119) domain
This C terminal domain is fund in Penguin-like proteins associated with Pumilio like repeats.
Statistics
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PSSM-Id: 336928
View PSSM: pfam08144
Aligned: 60 rows
Threshold Bit Score: 130.794
Threshold Setting Gi: 309359837
Created: 28-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
4WZW_A       307 NDKYGRKVLLYLLSPRDPAHTVREI---IEVLQKGDGNA--HSKKDTEVRRRELLESISPALLSYLQEHAQEVVLDKSAC 381
gi 296426060 426 cDKYGRTPLLYPFSERHPRVVPRPA---LAVLEEIEKLResTSKKDPATRQSELRTHFSQPFLQCIAEHAEELIRDSFGC 502
gi 531861497 438 HNPNARTTLLYLFEGLSSSLFPASHafdVETLKEVHEIRktTSKKDNDLRRKELLAVLAPQLLSVIAAAPGELTSTTFGC 517
gi 631246845 441 NDPFARTTIRYLFEGLSKTLFPPNLssdLEILKEVHEIRktTSKKDAETRRKELVTALSPQLLAAIAASPNELVSSSFGC 520
gi 353235381 421 aDSNGRRALLYPLIYRSTRHVTPAM---AAVLATTDSIRelTSKKDDDVRKAEIRKAYSEDMLNQVKLHASKMITDTGGS 497
gi 302412373 440 NNQYARATLMYPIEGQSKALFLSNMsddKAILQEVHEIRktTSKKDDHIRRAELAAVLAPSLLSTIAAAAPTLLADSFGC 519
gi 927426774 389 NNANARITLLYLLEGFSKSLFPASNaydLDVLKEVHEIRktTSKKEDDVRRKELSAVLSPSLIDAIAASPSDLTSTPFGC 468
gi 927391801 388 NNANARITLLYLLEGFSRSLFPASHaydLEVLKEIHEIRktTSKKEDESRRKELAALISPSLIAAIEASPSDLTASPFGS 467
gi 587671955 427 NNPFARSTILYLFEGLAKSLFPSSQsfdVELLKEVHEIRktTSKKDEDIRRNELITAVSPQLITAIAEAPTELTATAFGC 506
gi 758189030 424 NNPFARTTILYLFEGLAKSLFPPSQsaeVEILKEVHEIRqtTSKKDEEIRRSELVTAISPQLISVIAEVPSDITATAFGC 503
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
4WZW_A       382 VLVSDILGSATGDVQPTMnaIASLAATGlhp------ggKDGELHIAEHPAGHLVLKWLIEQDkkMKENGRE 447
gi 296426060 503 QFITEVLLGSTGDKSPALqaLASTAAGNpkt------adDGDDPHVVNTAAVGRMYKTLVTGG--HYSSKEn 566
gi 531861497 518 QFITHVLMFETADKKSALqaIAQSAAGDprdep--aedgLSPRPHISKTPFGGRMLKSLIQGG--RFDKAAG 585
gi 631246845 521 QLVTDVLLDAVGDKTAALdaIAATAAGNpqped-sketyPPPMPHISQTPHGGRMFKTLIQGGrfDRESGQv 591
gi 353235381 498 LLVAEVLLHADGDVASATeaILLPFKADyp--------aKNGETHPVQLSHTSRMLKQLLQGG--HWSHANK 559
gi 302412373 520 HIVTEVLLSVEGDKTKALeaVAAVAEGDptaepmeldnhVAQQAHVSQTAWGGRALKTLIAGG--KYNKQTG 589
gi 927426774 469 QFVADVLLSGIGDKQKALeaLAQSVSGSpkqep--sedeIAPRSHIANTPFGGRMLKSLIQGG--RFDRATG 536
gi 927391801 468 QFVADVFLSGIGEKQKALeaLAQSVSGSpkqep--aedeIATRPHIANTPFGGRMLKSLIQGG--RFDKAAG 535
gi 587671955 507 QFITDVLLSGVGEKQAALeaIAQSASGDpsqep--aeddLQPQIHISRTPHGARMLKSLIQGG--KYDKAAG 574
gi 758189030 504 QFVTDVLLSGVGDKQQALeaIAQSASGNpseep--seddLQPQVHISRTPHGGRMLKSLIQGG--KYDKTAG 571
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