Conserved Protein Domain Family
TRAUB

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pfam08164: TRAUB 
Apoptosis-antagonizing transcription factor, C-terminal
This C terminal domain is found in traube proteins. This is the domain of the AATF proteins that interacts with BLOS2 or Ceap, that functions as an adaptor in processes such as protein and vesicle processing and transport, and perhaps transcription.
Statistics
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PSSM-Id: 311887
View PSSM: pfam08164
Aligned: 130 rows
Threshold Bit Score: 94.1649
Threshold Setting Gi: 402586025
Created: 26-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74593549    445 YQSLLRDLVSQRMssTD----AI-TNGLdtlhI-LPsrngagaihpitgMRKDKVK---RE--VDTRASKGRKMRFDVHE 513
4_pfamImport     1 YEQLLKEFLESGNdaGVagg--------------------------psvVSKQIKR----RknVDRKASKGRKIRYHVQE 50
gi 124466877   332 YLDLLKETVSFNNqnPTee-----------------------------aLKKETEQqekENkvVDRKASKNRKIRFEPHQ 382
68_pfamImport    1 YHELLKEYMTEIEenKE----VGeDGLLfdstRlYLle---------rkLKQQEKK----QkiVDRRASKSRKIRFDVHQ 63
115_pfamImport   1 YHQLLKEFLESCDtgASesaf-------------------------yalRKKQNKK----RklVDRRASKSRKIRYSVHE 51
80_pfamImport    1 YQQLLKEFFEAVDpaSSetaf-------------------------yalKRLQTKK----RkiVDRRASKSRKIRYNIHE 51
32_pfamImport    1 YRQLLKEFLETIDpaSPsdnqAAfy----------------------emKKFQTKK----RkiVDRRASKSRKIRYNVHE 54
18_pfamImport    1 YQHLLKDFCTSSTanISgstaPlk------------------------aKRSSKST----RkqVDRRASKGRKVRYTAIP 52
gi 298705461   520 YQHLLKEFMDASGtaGS----GY-SAVP----V-----------------RRKSRK---KS--VDRKASKGRKIKYVTHP 568
gi 586672175   328 YQQLLKEFLESFDprSS----GA-NVNG----L----------------KRPQKKR---KV--VDRRASKSRRIRYNVHE 377
                           90       100
                   ....*....|....*....|....*...
gi 74593549    514 KLQNFMAP-EErGTWTKRAREEFFASLL 540
4_pfamImport    51 PLVNFTQA-ND-VEIPAWA-ERVFSQLF 75
gi 124466877   383 KIVNFTSR-IE-PPVETISREEIIKNLF 408
68_pfamImport   64 KLVNFMNP-ID-NKELLEGRNEIIKCLF 89
115_pfamImport  52 KIANFMAP-VP-MTVPPMA-SKLFENLF 76
80_pfamImport   52 KIVNFMAPnQP-VNLPEMA-PKLFENLF 77
32_pfamImport   55 KIVNFMAP-RP-AKIPPNT-ADLLKNLF 79
18_pfamImport   53 KLVNFTFPlSR-PDTGSLDQDAWFQSLL 79
gi 298705461   569 KMQNFMFP-QE-YEAPPMEPSELFASLF 594
gi 586672175   378 KIQNFMAP-MP-MVLPDMA-PKLFENLF 402
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