Conserved Protein Domain Family
TRAUB

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pfam08164: TRAUB 
Apoptosis-antagonizing transcription factor, C-terminal
This C terminal domain is found in traube proteins. This is the domain of the AATF proteins that interacts with BLOS2 or Ceap, that functions as an adaptor in processes such as protein and vesicle processing and transport, and perhaps transcription.
Statistics
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PSSM-Id: 336944
View PSSM: pfam08164
Aligned: 127 rows
Threshold Bit Score: 54.9045
Threshold Setting Gi: 470252740
Created: 27-Mar-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74593549   445 YQSLLRDLVSQRMssTD----AI-TNGLdtlhI-LPSrngagaihpITgmRKDKVK---RE--VDTRASKGRKMRFDVHE 513
gi 124466877  332 YLDLLKETVSFNNqnPT-----------------------------EEalKKETEQqekENkvVDRKASKNRKIRFEPHQ 382
gi 669027787 2390 YHQLLKEFLESC----D----NG-ASES----A-FYAlr----------kKQNKKR---KL--VDRRASKSRKIRYSVHE 2440
gi 586672175  328 YQQLLKEFLESFDprSS----GA-NVNG----Lk----------------RPQKKR---KV--VDRRASKSRRIRYNVHE 377
gi 219112373  183 YQHLLKDFCTSSTanISgstaP------------------------LKakRSSKST----RkqVDRRASKGRKVRYTAIP 234
gi 297842902  173 YRQLLKEFLETIDpaSPsdnqAAf----------------------YEmkKFQTKK----RkiVDRRASKSRKIRYNVHE 226
gi 969996085  331 YQQLLKEFFEAVDpaSSet-------------------------afYAlkRLQTKK----RkiVDRRASKSRKIRYNIHE 381
gi 829182836  441 YHELLKEYMTEIEenKE----VGeDGLLfdstRlYLL---------ERklKQQEKK----QkiVDRRASKSRKIRFDVHQ 503
gi 145354508  373 YEQLLKEFLESGNdaGVag--------------------------gPSvvSKQIKR----RknVDRKASKGRKIRYHVQE 422
gi 303287276  540 YEQVLKEFLESAGagGAgsggSGlAG--------------------FAaaAKPPKR----RkiVDRRASKGRKLRYHVQQ 595
                          90       100
                  ....*....|....*....|....*...
gi 74593549   514 KLQNFMAP-EErGTWTKRAREEFFASLL 540
gi 124466877  383 KIVNFTSR-IE-PPVETISREEIIKNLF 408
gi 669027787 2441 KIANFMAP-VP-MTVPPMA-SKLFENLF 2465
gi 586672175  378 KIQNFMAP-MP-MVLPDMA-PKLFENLF 402
gi 219112373  235 KLVNFTFPlSR-PDTGSLDQDAWFQSLL 261
gi 297842902  227 KIVNFMAP-RP-AKIPPNT-ADLLKNLF 251
gi 969996085  382 KIVNFMAPnQP-VNLPEMA-PKLFENLF 407
gi 829182836  504 KLVNFMNP-ID-NKELLEGRNEIIKCLF 529
gi 145354508  423 PLVNFTQA-ND-VEIPAWA-ERVFSQLF 447
gi 303287276  596 KLVNFCAP-VE-LEVPEWA-EKVFARLF 620
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