2YRV


Conserved Protein Domain Family
RBB1NT

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pfam08169: RBB1NT 
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RBB1NT (NUC162) domain
This domain is found N terminal to the ARID/BRIGHT domain in DNA-binding proteins of the Retinoblastoma-binding protein 1 family.
Statistics
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PSSM-Id: 311890
View PSSM: pfam08169
Aligned: 30 rows
Threshold Bit Score: 110.375
Threshold Setting Gi: 241748277
Created: 20-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2YRV_A          13 LGKVVSVVSATe-----R---TE-WYPALVISPSC-NDDI--TV-K-KDQCLVRSFIDSKFYSIARKDIKEVd-IlNLP- 76
gi 74805059    173 IGKVVCVETSDnkkknpK---EN-WFPGLVVAPTA-QDTV--RI-RvKDEYLVRSFKDGRYYTVPKKEATEFt-RdSVN- 242
gi 752866695   185 IGKVVCVELGDk-----Kk-kDN-WFPGLVVAPTA-QDTV--RI-RvRDDYLVRSFKDARYYTVPKKEATEFt-KeLVN- 251
gi 1028665253  188 IGKVVCVEANDk-----KkvrDN-WFPGLIVAPTS-QSSV--KT-NiAEDYLVRSFKDGKYYTVPKKEITEFt-KeIGA- 255
gi 242010295   176 VGKVVCVELGDk-----KkvkDN-WFPGLVVSPNA-QDTV--QI-RvKDEYLIRSFSDGRYYTVPKKEASEFt-ReIGI- 243
gi 642930274   169 IGRVVSVEATDk-----KrgkDN-WFPGLVVIPSA-QPTV--RI-NvKDEYLVRSFKDGRYYTVPKKEVSEFn-ReMGE- 236
gi 762129019   180 VGKVFLAEIGEk-----K---KQ-VLPVLVVLPDA-HATE--LR-T-KDHLLVKSFKDGKFHTYQRKELKDFs-KeAIA- 243
gi 118344402   204 MGNLVLVEPTDk-----R---KH-WYPAVVVNPMCyENYN--EV-K-DNHFVIRSFKTGKIARVLR--CNKLt-RnNGPf 267
gi 779996098   183 VGKIVIVEMNEk-----R---KNsFFPALVVDPSC-TKDV--QTnR-KDYIVARSFKDNKFYTVSRSSRKPFlsKdHTY- 249
gi 241748277   168 VGRVGCLDVGDk-----Rk-rDS-WVPVLVVSPSA-TGSAggQL-G-RDELLVRSFRDSKFFQVTKRELREFs-RdSSA- 235
                           90       100
                   ....*....|....*....|....*.
2YRV_A          77 ESE-Ls-T-KPGLQKASIFLKTRVVP 99
gi 74805059    243 KSE-Aa-----AVSAAIEYMDNDVLP 262
gi 752866695   252 KVE-NstL-KVAVEKALLFLEKNELP 275
gi 1028665253  256 RVE-NptL-KTAVEKALFFLDKDELP 279
gi 242010295   244 KVD-NntL-KTAVEKALHFIDKDELP 267
gi 642930274   237 KVE-SsvL-AEAVGKALKYLDHNELP 260
gi 762129019   244 KIE-Dk-NaKQALERAVTFSEKQELP 267
gi 118344402   268 KVE-Ps-W-KDVLDDAFRWEETGAIP 290
gi 779996098   250 KGDvAs-L-KAANEKAVTFIDTGQLP 273
gi 241748277   236 RVE-SnaL-RSAVDRALAFLDQRVLP 259
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