1AF2


Conserved Protein Domain Family
dCMP_cyt_deam_2

?
pfam08211: dCMP_cyt_deam_2 
Click on image for an interactive view with Cn3D
Cytidine and deoxycytidylate deaminase zinc-binding region
Statistics
?
PSSM-Id: 336957
View PSSM: pfam08211
Aligned: 76 rows
Threshold Bit Score: 100.658
Threshold Setting Gi: 255073085
Created: 26-Mar-2017
Updated: 23-May-2017
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1AF2_A       157 LRDYLPDAFGPKDLEIKt----LLMDEQDHGYALt--------------GDA---------------------------- 190
gi 503149196 187 mDDLLPFPFNPAALETAg----AIPGHVAHDLALa-------------dG-P---------------------------- 220
gi 302767722 135 LSRFLPHRFGPDDLLAQdldfpLLLESRNNGLVFegldhkcyrgreedgLDLsgle------------------------ 190
gi 125527469 155 vASLLPRPFGPHDLLPKhv--pLVLEPHDNPLGEpasvangfahgdleaR------------------------------ 202
gi 769799264 138 LSYFLPHRFGPDDLLSSdv--pLLLDCHNNRLQFldkpdheeeneelrfSKEithretvannddlchnglcngnindvee 215
gi 168067281 133 LSYFLPHRFGPDDLMSRnf--pLLLESRSNDLILasfgawlr---------------------------------dnkhs 177
gi 168016627 133 LSYFLPHRFGPDDLLSKdf--pLLLESRANGLepslnswlr----------------------------------nskrs 176
gi 255073085 188 lcDLLPHSFGPLDLTHDes-lpLMLEERHNGLRFipgltpea----------------------------------tdel 232
gi 159471161 201 LNDLLPERFGPADLQDEpf--pLLLEQQSNSVAWspeaeaamaeagrrgDSAfa-------------------------- 252
gi 552848804 127 LGQLLPMRFKPADLLPDpa-tpLLLQPQDNRVQLtatarkllkaragdaAFEr--------------------------- 178
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1AF2_A       191 ---LSQAAIAAANRSHMPYSKSPSGVALECKDgRIFSGSYAENAAFNPTLPPLQGALILLNL-KGYD------YPD---- 256
gi 503149196 221 ---ARDLLIHAGNRAHVPYSHCPSALVLELGDgTQVWGTSIESCAYNPTIMPAQAALIMLLD-HGHS------YGD---- 286
gi 302767722 191 desLRDTALEAANKSYAPYTGCPSGVAIFTRSaRVFAGSYCESAAFNPSLPPLQAAIVAFVAnGGGG------YQD---- 260
gi 125527469 203 ---LREAAEAAARAAHAPYSECPSGFAVADGEgKVYAGGCLESAAYNPTLGPVQAAIIGMVAaGGGA------AGD---- 269
gi 769799264 216 fdnLKKAALKAANGAHAPYSRCPSGVALMTADgGVYAGGYIESAAYNPSLGPLQAALVAFVAaGRGG------YGE---- 285
gi 168067281 178 lvdLKLAAFAAANASYAPYSRCPSGASLVTRKgQVYSGSYIESAAYNPGLPALQAAIVAFICgGGGA------YDE---- 247
gi 168016627 177 lleLKTAAFVAANASYAPYSRCPSGVAIYTKKgEIYRGSYMESAAYNPGLPALQAAIVAFICgGGSN------YGE---- 246
gi 255073085 233 daaAAALALAEANAAYAPYSASPAGLALVDDDgVIHAGRSVESAAYNPTMSPLHAALVAAVGgAGMGdanggeWGR---- 308
gi 159471161 253 --qAAGEALAEAQKCYAPYTRCHSGAAIITTSgGVHSGGYIESAAYNPSMSPFHAAVVAAVTaGGLP------DGYgqvc 324
gi 552848804 179 ---AAAEALAAAVGSYSPYSRCPSGLAIVTQAgGVYSGGYVESAAYNPSLPPLQTAIVAAVI-DGMP------YTA---- 244
                        170       180
                 ....*....|....*....|
1AF2_A       257 IQRAVLAEKADAPLIQWDAT 276
gi 503149196 287 IARAWFARPKGAVVdlaras 306
gi 302767722 261 IVCAVLVEKKNSSVQQAPTT 280
gi 125527469 270 VVAAALVEKEAALVSQEATA 289
gi 769799264 286 LVRAALVEKSGAVISQESTV 305
gi 168067281 248 IDTVIIVERKGALVRHAPTA 267
gi 168016627 247 IEAAVLVETVDAPVRHAATV 266
gi 255073085 309 IESATLVEMSGAPVQYAGtv 328
gi 159471161 325 IREVVLAERPDAPVQHAANi 344
gi 552848804 245 VDEVVLVELADGQVQHARTT 264
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap