Conserved Protein Domain Family
Sigma70_r4_2

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pfam08281: Sigma70_r4_2 
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Sigma-70, region 4
Region 4 of sigma-70 like sigma-factors are involved in binding to the -35 promoter element via a helix-turn-helix motif.
Statistics
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PSSM-Id: 311954
View PSSM: pfam08281
Aligned: 141 rows
Threshold Bit Score: 37.0502
Threshold Setting Gi: 1005315813
Created: 23-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50
                 ....*....|....*....|....*....|....*....|....*....|....
4CXF_A       128 LARVASTLGKLDTGSREVIVLtAIVGMSQPEAAAVLGLSVKAVEGRIGRARAKL 181
gi 81846161  106 KVMITEILLVLSPRERQCYLLhMAQGWSMGEISEELNIGKSSVQQFIQRAKKKV 159
gi 81525489  124 KIRMEDAMSTMSTQEKKVFLLkHEKNLSYSQISDEMEISVRSVRSYLHRGEEKI 177
gi 732138    104 RDRIREALALLTDREKEMFLLhKVECFSYERIADLLGVKKSTVQTTIKRASLKM 157
gi 81837874  101 KVRLEDALSLLTEREKEVYLMsRGYCLTYREIARYLDITCSTVQSMIERAEKKI 154
gi 81589821  114 KNIIDSLLDTISTEYKEALLLrYQQDLKLDEISKILGMSISGVSRLIERAEKAL 167
gi 81435190   49 KLLIAQKLRELPENYRDVVLAhYLEEKSYQEIALQENIEVKTVEMKLYRARKWI 102
gi 81582067  114 ITKVQMVLRKMKEQDRTILLMk-FSGFRYKEIAQVLQIDDSSIGTMLARAKLKF 166
gi 446835523 114 ITKVQNVLSNMNERDRTILLMk-FSGFQYKEIADVLHIDISSIGTLLVRAKQKF 166
gi 654962879 152 FDDIELKMAELLSDLERKVLVlYLDGQSYQEISEELNRHVKSIDNALQRVKRKL 205
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