5DF0


Conserved Protein Domain Family
ChitinaseA_N

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pfam08329: ChitinaseA_N 
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Chitinase A, N-terminal domain
This domain is found in a number of bacterial chitinases and similar viral proteins. It is organized into a fibronectin III module domain-like fold, comprising only beta strands. Its function is not known, but it may be involved in interaction with the enzyme substrate, chitin. It is separated by a hinge region from the catalytic domain (pfam00704); this hinge region is probably mobile, allowing the N-terminal domain to have different relative positions in solution.
Statistics
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PSSM-Id: 337005
View PSSM: pfam08329
Aligned: 9 rows
Threshold Bit Score: 197.286
Threshold Setting Gi: 75353764
Created: 27-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
5DF0_A        17 AIPGTPVID-WADRNYAL--VEINYEAT-AYENLIKP-K-EQVDVQVSWNVWNGDIGDIAYVLFDEQQVW----KGDAE- 85
gi 75353764   24 AAPGQAIIS-WMETDFSI--IEIDQAAT-SYKSLVTV-K-DFAEVPVTWDRWSGESAEKWRVLLNGVVVHeesvSPAASq 97
gi 81544281   21 AAPSAPSVDvYGSNNLQFskIELAMETTaGYNQMVKY-H-EEAPITLKFNQWSGVTGNTYKIYFDGVEVA----TGPISg 94
gi 82016517   19 SKPGTPQIR-WATHKYSL--VEVNEQAQ-SYNSLVKTvH-ESVPVSLEWDVWSGARGDSVHLVWDGQVVK----EGSSDe 89
gi 82030445   17 AIPGTPVID-WADRNYAL--VEINYEAT-AYENLIKP-K-KHVDVQVSWNVWNGDIGDIAYVLFDEQQVW----KGDAE- 85
gi 123060857  28 AAPGKPSLA-WGETQFAI--IDVNQSAT-AYNQLVTV-K-DAAAVSVSWSLWSGNVGERAQVLLNGNQVW----EGASSa 97
gi 500839314  24 AVPGKPTLA-WGNTKFAI--VEVDQAAT-AYNNLVKV-K-NAADVSVSWNLWNGDTGTTAKVLLNGKEVW----SGASTg 93
gi 81726546   21 AAPTAPSVDmYGSNNLQFskIELAMETTsGYYDMVKY-H-DQAKITVKFNQWSGTPGDTYNIYFDGVKVA----TGAITg 94
gi 673533219  23 AAPGTPSIT-SGNDKFAI--VEVDQAAQ-DYNNLVKV-HnDGVDVKVEWNVWSGDAPTSAKVLLDGKTVW----SGAGSa 93
                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
5DF0_A        86 -SKRA-TIKVLVSGQFNMRVKLCNEDG----CSVSDPVLVKVADTDGGHLAPLEYTWLENNKPGRR 145
gi 75353764   98 -KAST-TLQVRQGGQYEMTVQLCNGSGateeCSTSAAKSIVVADTDGSHLDPLPMNVDPANGNYTT 161
gi 81544281   95 sQTTA-QFTYPKGGVYQLVIEACDATG----CTKSAPSEITIADTDGSHLKPLKMNVDPNNKSYTi 155
gi 82016517   90 lREQKiVYNVRKGGRSSVAVRLCDGEG----CSDSVPVEVVVADTDGSHLGRLEYEWRENNVPYQR 151
gi 82030445   86 -SKRA-TIKVLVSGQFNMRVKLCNEDG----CSVSNPVLVKIADTDGGHLTPLEYTWLENNKPGRR 145
gi 123060857  98 -SGTA-NFNVNEGGRYQMQVQLCNSEG----CTASDPKTIIVADTDGSHLLPLNAPLLENNRPYTN 157
gi 500839314  94 aSGTA-NFKVNKGGRYQMQVALCNADG----CTASDATEIVVADTDGSHLAPLKEPLLEKNKPYKQ 154
gi 81726546   95 gQTTA-TFDYGQGGLYQMEIEACDATG----CSKSDPAEITIADTDGSHLKPLTMNVDPNNKTYNT 155
gi 673533219  94 -AGSA-TFKVKKGGRYQEQVELCNTSG----CTKSASKLIIVADTDGSHLLPLNTTMKENNKTFAQ 153
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