Conserved Protein Domain Family
YscJ_FliF_C

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pfam08345: YscJ_FliF_C 
Flagellar M-ring protein C-terminal
This domain is found in bacterial flagellar M-ring (FliF) proteins together with the YscJ/FliF domain (pfam01514).
Statistics
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PSSM-Id: 337014
View PSSM: pfam08345
Aligned: 422 rows
Threshold Bit Score: 34.0966
Threshold Setting Gi: 503251754
Created: 24-Mar-2017
Updated: 23-May-2017
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81468030  265 EDRVDiTRFEYNLNWDKESYKDNSVspvvaipdNPntpysELkLvdgyslKVSsKETkeDFkgrGFTPDGPAGTEpNIAP 344
gi 506277836 258 PGNAN-VRVAATLSTNQVTTKTQSIqtq---kgKP---------------LTTpTQTq-TQtqtFTGNGTVPGGTlGTTG 317
gi 339286450 264 PGNAV-VQVSATLNFNQSQIQSTQY---------------GKgV------LSS-QQVqsSTstqSAAPTTAAGTT-GNVP 319
gi 504365628 260 PNNFA-VQVNAKLNFDQRHSESKTY--------APvi--dDSgI------IRSqEVN--TEsqeNGINGGAPGTD-ANIP 319
gi 506403689 261 PDNFT-VQVKAWLNFDKRQVESKTY--------SPvv--gDEgI------VRSqQEHeeSYegeNPVATGVPGTT-SNIP 322
gi 505139249 260 MNNFV-VRVNANLNFSQRSFKSTKY--------SPvv--dDRgI------VRSkQTKeeSEkgiSSSPEGVPGTT-SNLP 321
gi 502633510 267 PGKAV-VRVRVELDFDKKSTSRREF--------IPgp--dGKgV------IRSqQNVeeSYtgpGTPPGGAPGTT-TNIP 328
gi 493343618 267 PGKAV-VRVRVDLDFDKKSTSRKEF--------IPgp--nGKgV------VRSqQNTeeSYvgpGMPPGGAPGTT-TNIP 328
gi 504619058 265 PGKAV-VRVRVVLNFDKKRTAVKEY--------VPgp--sGKgV------PRStQSLeeTYtgpGVPPGGAPGTT-TNIP 326
gi 503928251 264 PGNAV-VRVRVELDFSRVSRSSKQF--------LPqg--nGKgV------VRStQVTeeNYsgtAAQSQGV-GTS-SNIP 324
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81468030  345 --GYKDTDYQkaEYSKAENINNYEFNRRVSEVQKQPWKVEKVNLSVVIDgvwekkekedgtgydRKYVPVSEDELRQIRK 422
gi 506277836 318 ---IATTGNQvsTYKQTSSTTQYAIGQVTQTVQQAPGAIQRLSVAVAVN---------------SHVKGLS---LAKLRQ 376
gi 339286450 320 v-YTTQSSGGptSTNSKTVISNYLVDTTKTNETVPGGAIQRLTVAVVVD------------------KKLTAQEAQSLKS 380
gi 504365628 320 qyQAEGTGEAs-SYDRENTITNYEINERIEEHIYAPGEVERLSVSVMLD------------------QDTDEEKIAQIRN 380
gi 506403689 323 qyQSVEEENSggTYESSDVITNYEINEKIEKHVYSPGSVERLSVAVIVN------------------SSLERDELQKIRN 384
gi 505139249 322 qyKVTDQEQQ--SRESSEEIINYEINKKIEKYVQSPGDLERLSVSVIVN------------------QKLNQQRKNMITE 381
gi 502633510 329 gyVVNPNQGGnvEYNKTDTVTNYDITTQESQTQSTPGAIKRLSASVIVD------------------GQLDEAASQNLRQ 390
gi 493343618 329 gyVVNTGTGGnvEYNRTDTVTNFDITTQESQQVATPGAIRRLSASVLVD------------------GTLNAQQTQSLKD 390
gi 504619058 327 gyVITSQAAGpsTYERAEGTTNYEISTREQEVVSTPGTLEKISASVLID------------------GELDQGVLEELRR 388
gi 503928251 325 gySVRTSGAGsgEYSKTDQVTNYEISTLQQNEERPPGTVKRITASVVIN------------------GSEQESPKEELYR 386
                        170       180
                 ....*....|....*....|..
gi 81468030  423 NLESAVGIDKARGDQISVITIP 444
gi 506277836 377 VVAAAAGIVPARGDTLSVVAVP 398
gi 339286450 381 LVASAAGIDYQRGDQLTVVGLP 402
gi 504365628 381 AVGAAIGYNEDRGDVLNISSIA 402
gi 506403689 385 AVQAAIGYDPERGDMVTVTSMD 406
gi 505139249 382 AISAAVGYNKQRGDEIKVVGMK 403
gi 502633510 391 TVAAAIGIDEARGDRLVIQAMK 412
gi 493343618 391 SVAAAIGFNQLRGDQLVIQGMK 412
gi 504619058 389 AVAAAVGIDEARGDELYVMSMP 410
gi 503928251 387 SIASALGVDENRGDQLTVTFIP 408
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