3JCK


Conserved Protein Domain Family
Rpn3_C

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pfam08375: Rpn3_C 
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Proteasome regulatory subunit C-terminal
This eukaryotic domain is found at the C-terminus of 26S proteasome regulatory subunits such as the non-ATPase Rpn3 subunit which is essential for proteasomal function. It occurs together with the PCI/PINT domain (pfam01399).
Statistics
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PSSM-Id: 312023
View PSSM: pfam08375
Aligned: 74 rows
Threshold Bit Score: 62.2076
Threshold Setting Gi: 154339920
Created: 22-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|
3JCK_A       365 NIYDSEDPQQVFDERIKFANQLHDEYLVSMRYPEDKKtqQNEKSENGENDDDtlDGDLMD 424
gi 74587259  415 DVYSTKLPQAEFDQRIKFCLSLHNESVKSMRYPNDNE--KENTNKEIEPSE---EVELLK 469
gi 598063013 414 DVYSTKLPQTEFDQRIKFCLSLHNESVKAMRYPNDND--KQNVTKEVEASe---EIELLK 468
gi 149244392 412 DVYSTNLPQAEFDQRIKFCLSLYNDSVKSMRFPDDNE--NKAITKDAEPSd---EVELLK 466
gi 575510743 403 DIYSTKLPQDEFDQRIKFCLSLHNDSVKSMRYPSENL--KDDTKNSETFEd---EFELLK 457
gi 754400724 409 NIYSTNQPQDQFNQRINFVNSLHNDSIKAMRYPPSSN--RTEISNKNESQd--dENELin 464
gi 354544139 410 DVYSTRLPQTEFDHRIKFCLSLHNDSVKSMRFPNDDD--KQPVNKEVEPSd---EVELLK 464
gi 146422890 403 DVYSTKLPQDDFDQRIKFCLSLHNDSVKSMRYPSADNr-SDINKHNLAAKED--EMDLLK 459
gi 150864783 414 DVYSTKLPQNEFDQRIKFCLSLHNDSVKSMRYPNDSDdkADAVKN--ESKED--EMDIMR 469
gi 294655162 418 DIYSTKLPQGEFDQRIKFCLSLHNDSVKSMRYPSDNNk-LDSNKNSLESKEE--EIDLLK 474
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