7JQ9,7JQ9,7JQ9


Conserved Protein Domain Family
UBM

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pfam14377: UBM 
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Ubiquitin binding region
This family contains repetitive element (RE) from a subgroup of HECT E3 ubiquitin ligases and the Y-family translesion polymerases, including human HUWE1 and Arabidopsis UPL1. Each of these repetitive elements are approximately 20 amino acids in length and contain two predicted helical segments separated by a Leu-Pro motif. The REs from the Y-family polymerases were shown to bind ubiquitin and were the basis for a novel ubiquitin-binding domain called the ubiquitin-binding motif (UBM).
Statistics
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PSSM-Id: 464159
Aligned: 162 rows
Threshold Bit Score: 31.7032
Created: 25-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7JQ9_A       3047 GNPGVTeVSP-EFLAALPPAIQEEVLAQQRAEQQR 3080
CDS39634     3014 QTDGSN-NNNsSFLASLPPALRREILTDMEDFQID 3047
TIB68397     3961 GAVGAM-GDPsPFFNSIEPSMRQFILMN--GEMLD 3992 Wallemia ichthyophaga
XP_002602917  200 ANPEQP-VDPaGFIQNLPSSLRQQVLADMDDTVLA 233 
XP_011414496  303 ANAEAP-VDPvSFLASLPSSLRQQVLADMDDSTVA 336  Pacific oyster
RDD42934     2895 PTSEQS-FDPaSFVRDLNPSLRRTVLADMDDTHVN 2928 Trichoplax sp. H2
XP_002430068 2900 TNHNDP-FDAaAFFQNLPLSLRQSILADIEESQIS 2933
XP_028140388 3143 ANPNEP-VDAgAFFETLQPSLRTMILSDMEDSQMS 3176 western corn rootworm
KZS07874     3109 ANPNEP-VDPaDFLSTLPPALRQSILADMEDSQMA 3142 Daphnia magna
XP_009019139 2993 QNPETP-MDPaSFIQSLPSSLRQQVLADMDDSMVA 3026 Helobdella robusta
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