Conserved Protein Domain Family
HDNR

?
pfam15115: HDNR 
Domain of unknown function with conserved HDNR motif
This family of proteins is found in eukaryotes. Proteins in this family are typically between 117 and 219 amino acids in length. There is a conserved HDNR sequence motif. The function is not known.
Statistics
?
PSSM-Id: 317525
View PSSM: pfam15115
Aligned: 16 rows
Threshold Bit Score: 129.878
Threshold Setting Gi: 196003080
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81891332     1 MAKG-RRFNPSLHKDGRWFTHI--GVI----EKIPESITSTSLKEIhcPYLSEQVEKRLPPIY----KIR--------EK 61
gi 699238104    1 MTKG-RKHVPSQEEQGIWFQHR--GMPvnveNRSSGTTTGIMLNRE--SATDNNSHVKIPPVF----AKR--------AK 63
gi 972970738    1 MPKG-RNWNPCMDRDGEWFSHL--GFPpipfKREAATSTGCMLTQ-----ATKHPPNGVPERYlktsRTT--------EG 64
gi 260817689    1 MPKG-RKFAPGNDCDGNWFRHRtrGYEtpkfQRHVDTSTGEMLTRPfsD-SSPSSQTNTPPKF----ANRldyvntqnAK 74
gi 156388302    1 MARSlYSNSAPPDLTGSWYN-T--GF-----HGHYRSRTRTDFAIPfrQRVKPAP----PQKF----LNY--------SK 56
gi 196003080    2 TTKD--------TLHGHWHP-----------RRHFTKIAANNWNDRfrHIAKPPp----PVKF----AQR--------SE 46
gi 402881772    1 MTKG-RRFNPplDKDGRWFPHI--GLT----QKTSESNTRAMLKEPqsPHSPWQvEGKLPPIY----KVR--------EK 61
gi 655883412    1 MAKG-RRFNPplDEDGRWFPHV--GLM----QKTPESITRATLKEPlcAQAARQvEGRLPPIY----KVR--------EK 61
gi 1033015249   2 SKGGkRYFNK--NKSVNWFVHT--GFSqteqTHHLCTSTGSALAHAvsQPLTPS-EQRYPKVF----INP--------EK 64
gi 395842715    1 MAKG-RRFNPplDKDGRWFPHI--GLT----QRTPESITTAMLKEPqcPHMSRQmEAKLPPIY----RIR--------EK 61
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81891332    62 QAANKNfPFSVHDNRHCFENSGY---YFDSGLGRRKCT----P-DQKQH--ISRNFNLW-ACDYIPSNL---DGFSN-NQ 126
gi 699238104   64 EASHTN-CFSSHDNRNSFQDHGV---YFGQGLGKQKVQ----G-EQRQH--SSQDVVTW-NKRNDPEYA---QGINSlYK 128
gi 972970738   65 NTEKREyPFSVHDNRFALHRTSE---MFDVGLGRRKAL----D-GFSQH--SSHNFFLW-TQDAVPLVSvdgDGMSF-YH 132
gi 260817689   75 RYDQVN-PFSWHDNRNSFQDHGE---YFGHGLGKQSVV----PvEKSLH--YSNNYIRW-TTRE-GSHT---DNMSS-YA 138
gi 156388302   57 ERSNSH-LFSRHDNRNTHSDMGDletFFGMGLGKRKYTrasaG-IATQHtkSTQDLITW-RGNEN-------DSMVStYR 126
gi 196003080   47 EVRQHR--FSLHDNRHTFSKEGA---YFETALGKKKST------TGTQFt-STRNLISWhGNNTD-------GSLLStYR 107
gi 402881772   62 QAVNNQfPFSVHDNRHSLENSGC---YLDSGLGRKKIA----P-DKRQH--VSRNFNLW-ACDYVPSCL---DGFSN-NQ 126
gi 655883412   62 QATNNSfPFSMHDNRHIFENSGN---YLDSGLGRKKIS----P-DKRQH--VSRNFNLW-ASDYVPSCL---DGFSN-NQ 126
gi 1033015249  65 KTMGREyPLSMHDNRTALQQCID---VYDQGSGRKKCL----D-ERRQH--NSHYSLRH-HHHGTPSLVtavKWEDSvYQ 133
gi 395842715   62 QAVNNNfPFSVHDNRHSLGNTVY---YFDSGLGRKKIS----P-DRRQH--LSRNFNLW-ACDYVPSCV---DGFSN-NQ 126
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 81891332   127 TSY---------------VHKKAVVVSS---FRRFPRCYDER--------------WIAST-----QSCPKFLGNQPN 167
gi 699238104  129 EDY---------------SGVDVTNRTH---HRRYSKHYKEPpqgl-------ikvTSNTT-----MWVDDNEKIDPT 176
gi 972970738  133 TEY---------------LGCQETDRPS---FRRFPQNHAQMsrg-----------saAQA-----GRDLVWFGRHDR 176
gi 260817689  139 VSF---------------RGDRDTESPT---RRRFPRTYSKPqqgrikl-dtattdWSN------------ESHRTPL 185
gi 156388302  127 THFeknpaitpiinetepVHIRSNLNL----RRRQLRAASAPptrq-------appLLAWNepdeaFYAKPGVGLRPQ 193
gi 196003080  108 SAY---------------R--NGTENPAldvCTQFIKSQKAAklkp------qtqtQsdyscdpstmalnhhAISRPT 162
gi 402881772  127 ISY---------------VHKEAVVVSS---FRRFPRCYKEI--------------Wntltflp-errytefLKKKPK 171
gi 655883412  127 ISY---------------VYKEARVDPW---FRRFPRCYAEV--------------Wstcrfip-ersypkiLRKKPK 171
gi 1033015249 134 KDF---------------LPRQQIESREdkiRRRFPRDHSARsqvnaaaqadqcfmW---------------FGRDDA 181
gi 395842715  127 ISY---------------VYKEAVVVPS---FRRFPRHYNEI--------------WrsfkfipeqrcytefLQKKPK 172
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap