Conserved Protein Domain Family
SYCE1

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pfam15233: SYCE1 
Synaptonemal complex central element protein 1
This family of proteins includes synaptonemal complex central element protein 1, a component of the synaptonemal complex involved in meiosis, and synaptonemal complex central element protein 1-like, which may be involved in meiosis.
Statistics
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PSSM-Id: 317616
View PSSM: pfam15233
Aligned: 15 rows
Threshold Bit Score: 99.8028
Threshold Setting Gi: 973137789
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 190359878   50 QIEDLIHRINELQQgpAKKRSSEELGEAQALQEAMHRELDSLNEERVHLEEVLRKKQEAVSILKKHPQERDSDT---PHL 126
gi 81905106    54 RIEVLINRINEVQQ--AKKKASEELGEAQTVWDNLQKELDLLREEKVRLKDILNRKEETLRIMQLHCQEKESEA---QRK 128
gi 620957744   47 RIEDLIIKIKDLQR--VRKNANEELLKTRAHSEALQRELDELNAEKAHLEEILNQKQETLMMLRLQCEEKQAEA---QRQ 121
gi 327263794   46 RIEDLVKKINKLQQ--AKKILSEELSEANEHSKSLQRELEKLNAEKSSLEEIWNEKKETRKVMQFHCEETEIKR---QWQ 120
gi 973137789   20 KMEDLMNKLRKLQK--GKTALEEELKEGESLKKTLKEELDALHTERSQLEKAYREKEDACKTLQYQCELKE-DT---NRG 93
gi 884868493   85 QIEDLIHRIYKLQQ--AKKKSGEELGETQALWEALNRELDSLNGENLHLEEVLNKKQEALRILQQHRQAQESGA---PR- 158
gi 444722291  747 QIEDLINRINELQQ--AKKKSSEELGEAHAVWEALHRELDSLNGEKVHLEEVLSKKQEALRILQLHCQERESGA---RR- 820
gi 914901907   51 QIEVLINRINEVQQ--AKKKASEELGEARTVWDALQKELDSLHEEKVHLKEILSKKQESLRILRLHCQEKESEA---QRK 125
gi 426366673   52 RVEVLINRINEVQQ--AKKKANKDLGEARTICEALQKELDSLHGEKVHLKEILSKKQDTLRILRLHCQEKESEAhrkHTm 129
gi 914898781   44 QIGDLINRINELQQ---AKKANEELGETQARREVLCKELDSLNGEKVHIEEVLSKKQEAVMILRQHCQERDSEA---PR- 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 190359878  127 D---------------------------A---------------------------QQLEERLADLARQHKDLWEFHVlQ 152
gi 81905106   129 H---------------------------SmlqeckerisflnsqidkekaklrklrLDFEEHLETLMSQHKDTLEFHK-P 180
gi 620957744  122 QevsqgckqrieeltskiqeeklkqrkqR---------------------------MEFDQQLEEMMEKHKSLWEFHT-S 173
gi 327263794  121 QklnleckqrieavtakiqaekrkqskqR---------------------------MEFEQLLEELMEKHKRLWELY--- 170
gi 973137789   94 HqlnseheqlleeytfkiqeaklkhrkqR---------------------------MKFENQLQQLLEDHKNMYSIYS-P 145
gi 884868493  159 --------------------------------------------------------SAAEEQLKDPVARHKALWEFRVlE 182
gi 444722291  821 --------------------------------------------------------SDVREELEEPTGLDTDLWEFYMlR 844
gi 914901907  126 H---------------------------TllqeckerifalnsqieeeknkqrqlrLDFEEQLEALMGQHKDLWEFHR-P 177
gi 426366673  130 lqeckerisalnl------------------------------qieeeknkqrqlrLAFEEQLEDLMGQHKDLWDFHM-P 178
gi 914898781  117 --------------------------------------------------------LDVEEQLEDLMDQHKDLWEFHMlE 140
                         170       180
                  ....*....|....*....|
gi 190359878  153 QRLAQEISTMEHRKDQLLAE 172
gi 81905106   181 EHLTKEMCVLDSSKEQLLKE 200
gi 620957744  174 ESLAREISNIEDSKKHLLNE 193
gi 327263794  171 -SRDQPVADMKDSKERLLKE 189
gi 973137789  146 ERLPVEIENAENANAQLLKa 165
gi 884868493  183 QRLAREIRALERSQEQLRAq 202
gi 444722291  845 QRLAREIRALESSREQLRAE 864
gi 914901907  178 EQLAREICTLDSSKEQLLKE 197
gi 426366673  179 ERLAREICALDSSKEQLLME 198
gi 914898781  141 QRLAQEIGILERSKEQLLAE 160
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