Conserved Protein Domain Family
ALMS_motif

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pfam15309: ALMS_motif 
ALMS motif
This domain is found at the C-terminus of Alstrom syndrome protein 1 (ALMS1), KIAA1731 and C10orf90.
Statistics
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PSSM-Id: 317682
View PSSM: pfam15309
Aligned: 18 rows
Threshold Bit Score: 113.986
Threshold Setting Gi: 968078369
Created: 28-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 823452638 1025 TPGSLQKSFLKRKQNFIQESLKRVEAI--KNKERENEKLEArklq--ggkSENLRSRQKksdllsgkngalANQLKKVEV 1100
gi 260817720 2725 ERLTLQEALKMRNPAFISKSRERVRRMelAAEERRHEEAFEm-------eRMRLFGEER------------RRLQATEPA 2785
gi 156363782 1671 QRLSLQEAFNFAKPDFVSRSRARLNRIgrNRVVRERGEVTQd-------gEQRVTKMEIpvkgsgeqarkpNQAPRKTHL 1743
gi 313246283  934 QRASLQEAVLIHKQEFISSSRARVRHVklRKEQRFIEKELDd-------qRRKIFGVGTy----------tDKQRAAKIH 996
gi 357631606 1508 REFTVREYLEQNRPDFVEKSSNRQHCLklINESRANERITKrqllslqldKQQTLNSLTntelqnlarelgNELRRKKVA 1587
gi 968078369  917 eTLSLQDQLQRARPEFCAKSKQRKa---iLNQMQMLRNVRRr-------eMDELLCENIntnv-----etvDKQLQQLPP 981
gi 611985566 1572 VKAGLQECLERNRPDFISSSGARVKRLklITEERKLQHLLQr-------eRDALFNTTEqq---------kVSQDFACFL 1635
gi 823463429  580 tslFLQEALEIHNPEFISRSQERLKRLelMVQLRRAQH------------REAPPGTPRaltpklststssRKKQFTIPD 647
gi 733898080  551 tpltLQEALEIHKPHFISRSQERLKKLehMVQQRKAQQ------------SDAPVSTPRklssa---stsnKKKQYTVPD 615
gi 301761482  572 gSLTLQEALEVHKPQFISRSQERLKKLehMVQQRKAQR------------KENLGQKQSvfp------vraNKKQFTVPH 633
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 823452638 1101 KV--C----SPEDRKSGEIEMHQRTSRLYNQLAEVKIRNEEKRRQQTYAKNREKAKEFQKKMLEKLRAKK 1164
gi 260817720 2786 PL--SenlhRPKKRTITKKEMAARSKRMYEKLPEVQRKKAQERRQAAYKSNRIKAQLFKKKVLDSLRRKN 2853
gi 156363782 1744 PEnnR----VPRPRRLSKKEMRELNQKLYNNLPEVKAQKDENKRAAFYKTNRLKAQLYDKRVRDRLKKRy 1809
gi 313246283  997 PL--AdkffLQEKRQINLREARKETTERYNKLPEVRGKREDEKTNRKKVENQIKTKVFAKKIQRQVLNql 1064
gi 357631606 1588 P------------KFINEREMKKHSEKIYKSLPEVMRQKEEMKKENIKKTNLLMASLFKKNLQKKTLsgd 1645
gi 968078369  982 PA--A-----SRIRIFSTKEMKALTSKRCQSLPEVLAAQNRMREEQRRRNNRMMRDVFNRRLHSRVAKgq 1044
gi 611985566 1636 skkgh---vtsrNRTITKKEMVQRSKRMYEQLPEVRKKREEEQRRSAYTAYRFKAQLYKMKITNRVLGRK 1702
gi 823463429  648 PL--SdnlfKPKERVIPEKEMHMRSKRIYDNLPEVKKKQEEKQKRIIIQSNRLRVEMFKKQLLDQLLHRN 715
gi 733898080  616 PL--SdnlfKPKERFIPEKEMHMRSKRIYDNLPEVKKKQEEKQKRIIIQSNRMRVEIFKKQLLDQLLQRK 683
gi 301761482  634 PL--SdnlfKPKERYISEKEMHMRSKRIYNNLPEVKKKKEEQKKRVILQSNRLRAEVFKKQLLDQLLQRN 701
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