Conserved Protein Domain Family
FAM104

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pfam15434: FAM104 
Family 104
This family of proteins is found in eukaryotes. Proteins in this family are typically between 113 and 185 amino acids in length. There is a conserved SLQ sequence motif.
Statistics
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PSSM-Id: 317790
View PSSM: pfam15434
Aligned: 15 rows
Threshold Bit Score: 74.4408
Threshold Setting Gi: 542233469
Created: 1-Aug-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
4_pfamImport    1 RKRRRNGNEDDS-------------HI-PQTKRSTRNTVL----QDSWDTEkvavtknskeh-rlkgnkvscaSSSSDSG 61
1_pfamImport    1 MKRRPDDNEDDN-------------YRpPRSKRIKKDQDI----QEHHAIE----------------------STSSDNE 41
14_pfamImport   1 RKRRRGCDAEEL-------------QVlPQPKRSGGYSFLpevgHDVWDSE----------------------SSSSDSS 45
10_pfamImport   1 RKRRRNGSEEDH-------------HLpPQTKRSSRNAVF----HDSWDTEnkvpvtrnskenrlsgnkvlcmSSSSDSG 63
6_pfamImport    1 ------GGAEETpevavvrvraggiHRlPSPP-VRR--------QEQRAEE----------------------SSSSDSG 43
3_pfamImport    1 RKRRRNGIEEDG-------------LI-PQTKRSSRNAVF----QDSWDTEqvlvskds-------rrhiscmSSSSESG 55
15_pfamImport   1 RKRRRNGNEDDG-------------HI-PQTKRSTRNSVL----QDSWDTEkvavtkltker-rlkgnkvpcaVGSSPSI 61
gi 914927274   40 RKRRRDSNLEDN-------------HHcSHFKRTKRNFVF----QDFQNTEtvleskssae--sqlsgnqmyaSSSSVIE 100
gi 984142159   24 RKRKRDGNQEDN-------------HHcFHSKRTRRNLLF----QDSQDKE----------------------YSSSVTE 64
gi 556951956    6 RKRRRSCEDEDI-------------HLlPQPKRISSNTFL----HDFWDTE----------------------SS----S 42
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
4_pfamImport   62 SSSSscs-ssSINSPDRASG---PEPSLNP-----IVTGSSPVS-SQSFHEQ-SAls---qgPYFHINQILKEAHFHSLQ 127
1_pfamImport   42 RNQG------SINNPNRERV---PESSLNP-----STAELDSNI-PGFSQEEdYEvcq-dqdPYSHINNILKEAHFYSLQ 105
14_pfamImport  46 GISS----------PEQMAG---ATSSIQKpdqrgIYISQAPCS-PGIAVEE-PAvslshsiSYDHINRILREAHFSSLQ 110
10_pfamImport  64 GSSSs-----SINSPDRASG---PESSFNH-----LASGSSPHT-PQPVPEP-SAlc---qgPYFHINQTLKEAHFHSLQ 125
6_pfamImport   44 GSSSt-----SIHSPDRASG---PESGLSQ-----VMPGSSPNT-PQPMPEQ-SAlc---qgPYFHINQTLKEAHFHSLQ 105
3_pfamImport   56 STSScc--ssSISSPDRRSG---PETSPPQ-----IMPGSSPVTpPQSFLEQ-SAlc---qgPYFHINQILKEAHFHSLQ 121
15_pfamImport  62 ACDSlccsasSINSPDRA------ESSLNP-----RIAGSSPVS-SQPFHEQ-SAls---qgPYFHINQILKEAHFHSLQ 125
gi 914927274  101 RNIS------SIHSPVRAGG---PESSLNQ-----IIAEYNLNT-RQFFHEE-NMls---qgHYCQINQILKEAHFYSLQ 161
gi 984142159   65 RNIS------SIHSPERAGG---PESNINR-----IAAEHDLST-CQFLHEE-NMls---qgPYCQINQILKEAHFYSLQ 125
gi 556951956   43 SDSS------GVSSPDRPSGllpADIGVNQ-----RNPGCSPSTsYQYPYEQ-SAls---hgSYVHINQILKEAHFHSLQ 107

                  ....*..
4_pfamImport  128 SrGRPPT 134
1_pfamImport  106 QrGHSPT 112
14_pfamImport 111 TrGQ--Q 115
10_pfamImport 126 HrGRPPT 132
6_pfamImport  106 HrGRPLT 112
3_pfamImport  122 SrGRPPT 128
15_pfamImport 126 SrGRLPT 132
gi 914927274  162 QrGQPPT 168
gi 984142159  126 QrGQPPT 132
gi 556951956  108 HrGNPLT 114
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