4JOI


Conserved Protein Domain Family
Ten1_2

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pfam15490: Ten1_2 
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Telomere-capping, CST complex subunit
Ten1_2 is a family of primarily plant and vertebrate telomere-capping proteins that is evolutionarily related to the mostly fungal family of Ten1, pfam12658.
Statistics
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PSSM-Id: 317841
View PSSM: pfam15490
Aligned: 25 rows
Threshold Bit Score: 104.621
Threshold Setting Gi: 122156904
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
4JOI_D         2 LPKPGTYYLPWE-V---SA--GQVPDGSTLRTFGRLCLYDMIQSRVTL-------MAQHGSDQHQVLVCTKL--VEPFHA 66
gi 74852423    5 IIEHSKIVMIDEiMnnsKE--FSLKERSSIKTIGILKLIDLDNNLALL-----------EYKQTFLYCTIDQf-ISHLPS 70
gi 75127046    5 QIEPGVPITLQE-Ly-pSS--LFYKEGVSLRVTAMLRGYSVETAIGVI-----------EDGGRSLKINTQN--IRDVSF 67
gi 72166003    5 LPPHGDILRLSE-I---HErgPLLMAGKSVRVMGKLTRYDAIEQLALI-------TSSERNSTHHLQVNTRL--VEPFQS 71
gi 195996169  13 DRGYSEILRISEiV---SR--GKELNGRDIKTIGRVQLYDAMTSRATI-------SCAEDDPNSQLVVITEF--IEPLMS 78
gi 168060471   5 TLNPGLVVRLQE-Lq-pGS--SFVLPNQSLRVVGSLQSFDSTSGIAVL-------V----DAGASLRLDLEH--LRELPL 67
gi 514699471   5 VSRDAHVVLLPS-----HV--SSLPPGQCVRVVGALHSFDLSTQTMVL-----------GHRGARVRINAAL--LGPVPI 64
gi 225450753   5 AVKSGALVSLQD-Lq-pSS--PFFKQGASLRVTGKLQEYSVETAIAIV-----------IDGSANLKINTQH--LRDLTF 67
gi 242042996   5 gPKPGVPVILRE-Le-pSS--EMFKQGASLRVTGSLQSFEVDSATAVI-----------QDGSVSLKVDTQH--LRDISF 67
gi 122156904  10 GMPAGAIVRFDE-LvdiAS--GADGREVSVRALCTVTSLDVANARVTAtttrsrrDAKTSTSESEREIEIDFsaVRADEH 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
4JOI_D        67 ---------QVGSLYIVLGEL--QHQ---QDRGS--------------VVKARVLTCVEGMNLPLLEQAIREQRLYKQER 118
gi 74852423   71 ---------KLNTYYQIIGEL--EKPnlkQQKEIekrenlgnninkdwILNSRVYRLIDGIDIDLYKESLIVRRNFEQQN 139
gi 75127046   68 ---------RVGSIYQFIGEL--HIEq--PNNEA--------------ILQARTGRNVDGIDMNLYRKTIELLRQFLKEE 120
gi 72166003   72 ---------RIGSTFQFIGEMpsEME---RDADM--------------VVHARVVRCVDGIDSTMYYNACDVQRKFLASR 125
gi 195996169  79 ---------GSKATYQFIGEL--EWQp--QDSAL--------------ALNARTCRDVSKLDITRYYQGLDSMRKFLNSN 131
gi 168060471  68 ---------RVGSLFEFIGEL--EVD-------T--------------TQQARVGRNVDGMDMKLFDKVLQLRRRFEKDY 115
gi 514699471  65 ---------RRGDIWTILGYT--AHD---QTSVI--------------VVEAQAGRITPDVDVPLLERCIDARQRYLEQL 116
gi 225450753  68 ---------RAGSIYQFIGEL--LIQ---PDNEA--------------ILQARVGRNVDGIDLNLYHQSLQLVRQFQADH 119
gi 242042996  68 ---------RTNSAYQFIGEL--QIR---EGNDA--------------TLLARIGRNVDGLDLNLYQQAILIRRQHEAKl 119
gi 122156904  87 gafedgqiyRRGARVCVIGEA--RARa--DDGKI--------------ELRARVARAVDGLDLDAYEKLLEMRRKFLAGL 148
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