Conserved Protein Domain Family
SRCR_2

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pfam15494: SRCR_2 
Scavenger receptor cysteine-rich domain
SRCR_2 is a scavenger receptor cysteine-rich domain family found largely on vertebrate sequences up-stream of the trypsin-like transmembrane serine protease, Spinesin.
Statistics
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PSSM-Id: 317845
View PSSM: pfam15494
Aligned: 35 rows
Threshold Bit Score: 65.841
Threshold Setting Gi: 1019050764
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82255991    28 LLEIQLGKLPTWLPVCYERWNSSLGTLVCRQLGYLRLTKHKGVNLTDIGPNYTDGFIQI-------TPEHNSNLeNIWQ- 99
gi 1033380407 178 LLRVFSAAEQEWLPVCSQDWTAAFAQKTCQQLGFGNVSETDSVTLSHSGKS-------Ll------PAALKDTIqQSLN- 243
gi 330864788  116 VLQVFTA--ATWRTVCAEDWKSHHATVACAQLGFPSYVSSDTLRVDSLEEQFREDFVSInhllpddKVTA---LhHSVY- 189
gi 733873112  138 VLQVFTS--GSWRTVCSDDWKAEYGNTTCKHLGFSSYVSSGYLPVAAVEKQFQRHFVSLshwlpmdQVTS---LhNATN- 211
gi 512869699  140 VLQAYTA--GSWRTVCSDEWKGLYGNLTCKQLGFSSYVSSIYLPVEAVEEQFRRHFVSVtpspkfaGQTSl--LqQLIN- 214
gi 768932078   97 VLQVYSPG-SGWRSVCSDGWKQQHTEAACKKLGYTYKPRSSTVPVGDLIQS-----LKMgpftairNELTstpIhQATI- 169
gi 187608481  104 VLQVYINA-SGWRTVCADNWRTKHTRLTCQQLGYTVSPRSTRIPVRSLFFNPQNEFATVs------NDSAqsdIqSFLS- 175
gi 733921069  185 ILQVLNRNTGAWSCICSDHFSPALAKAACEEMGYSSIPTFYAVDAGAGQPLPPREL-VL--------------SsGRLQl 249
gi 1043416629 561 VLQLYVQARSSWSFICNDNWDTNKAKAVCAQVGFYSEPVSGTVSISDLSTSSALLYSTV-------QVLSdksIqVNPT- 632
gi 281349759  152 LLKVYSGSSHQWLPICSDSWNDSYSEKTCQQLGFVSAYRTTEVAHRDLASSF-----SI--------SKYnstLqESLY- 217
                          90       100
                  ....*....|....*....|....
gi 82255991   100 --LRGSCVTGKVISLQCFECGTRA 121
gi 1033380407 244 --RTSECPSRRYVTLRCSSCGQRl 265
gi 330864788  190 --TREGCTSGHVVTLKCSACGLRT 211
gi 733873112  212 --LREECNSGSVIALKCLACGMRA 233
gi 512869699  215 --PSEYCSSGNVITLKCVVCGLRP 236
gi 768932078  170 --DRSQCSSGSVVSLSCSDCGQVG 191
gi 187608481  176 --ASNKCSSGSVVSVSCSDCGEVV 197
gi 733921069  250 pePGRKCLSGSVVSLLCSSCGESV 273
gi 1043416629 633 --VWGSCTSGQVVSLRCAACGTgh 654
gi 281349759  218 ---RSECPSQRYVSLQCSHCGLRa 238
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