Conserved Protein Domain Family
PAF

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pfam15715: PAF 
PCNA-associated factor
Statistics
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PSSM-Id: 318016
View PSSM: pfam15715
Aligned: 8 rows
Threshold Bit Score: 60.2864
Threshold Setting Gi: 985417383
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 82182018    1 MVRTKADS-AgssassgSYRKAVAARAPRKTFGSSSSGSNH-V-TsptG-KKSESKYAGG-NPVCVRPTPTWQKGIGEFF 75
gi 405962951 165 MVRTKADGgSs-----sASRKVVAARAPRKALGGSGPSSSAsN-S---P-SGKSAKYAGG-NSACPRPTPDWQKGINSFF 233
gi 761906973   1 MVRTKANN-A-------CTRKAVAAKAPRKSLGGGGGGVRHnF-TspsSaGRKKGKGVGG-NPIRVHPTPAWQKGIDLFM 70
gi 985417383   1 -------mfdnltvsigkvpkiaackaaaasscsgssssghksasspsT---SKNKYSGGgNPVHPREIPVWQKEITCFF 70
gi 351699395   1 MVRTKAYN-Vr-----gTYRKVVASQAPRKVLSSSNSVTNS-SlLslsL-KKAENKYSGG-NPFCVRPTPKWQKGIGEFF 71
gi 817345946   1 MVRTKADS-Vp-----gTYRKVVAARAPRKVLGSSTSATNS-Tsl--sS-RKAENKYAGG-NPVCVRPTPKWQKGIGEFF 69
gi 395509772   1 ----------------------VAARAPRKALGHSSFANAS-Psp--pS-RKVESKYAGG-NPVCVRPTPTWQKGIGEFF 53
gi 597760751   1 MVRTKADS-Vp-----gSYRKAVAASAPRKSLGASSSANSS-SsSsqaG-TPAKNKYAGG-NPVCPRPTPTWQKGIGDFF 71

                 ....*
gi 82182018   76 GSPST 80
gi 405962951 234 QSPQK 238
gi 761906973  71 GGGss 75
gi 985417383  71 QAKnd 75
gi 351699395  72 RLSPK 76
gi 817345946  70 RMSSK 74
gi 395509772  54 GMSSR 58
gi 597760751  72 GGPPR 76
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