Conserved Protein Domain Family
CCDC117

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pfam15810: CCDC117 
Coiled-coil domain-containing protein 117
CCDC117 is a family of coiled-coil proteins found in eukaryotes. Proteins in this family are typically between 203 and 279 amino acids in length. There is a conserved MELV sequence motif. The function is not known.
Statistics
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PSSM-Id: 318104
View PSSM: pfam15810
Aligned: 9 rows
Threshold Bit Score: 158.816
Threshold Setting Gi: 528479405
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556959056 200 CEMARRQLQEIENRITVEDEDp---VESD--CFSNGPVLVMSDILKEELKKGFDDRITHEVVESLTRPCMELAVWKPTQI 274
gi 620961729  10 CEVARRKLQEIEERLIDEDEE----VEADr-SVSNLPTLIMSDALKTGLKRELDEVLTKKIIESMNRPSMELVLWKPLPE 84
gi 992191218  64 VEAAQRKLQEIEDRITLEDDSd---EDLDvdPAQRRPVLVLSDSLREGLQRGIGDILPETVAQSVSRSCMELVLWRPPED 140
gi 973203255   6 rvAAVQRLQEIEDRITLEDDDe---DDLEteSADRKPVLVISDSLREGLQRGIADIIPKKVVESMNHLCMELVLWRPPPE 82
gi 941758821 114 IEAAHRKLQEIEDRIILEDDDe--dLDVE--PVPRRPVLVISDSLKEGLQRGISDILPQTVAQSVSPSGMELVLWRPPED 189
gi 908503218 107 IEAAQRKLQEIEDRITLEDDEde-dLDVE--PAPRRPVLVMSDSLKKGLQQGISDILPHTVAQSVSRSCMELVLWRPPED 183
gi 694982497  10 CEVARRKLQEIEDRIIDEDEE----VEADr-NVNHLPSLVLSDTMKTGLKREFDEVFTKKMIESMSRPSMELVLWKPLPE 84
gi 823469371  18 CEVARRKLQEIEDRIIDEDEE----VHADg-SVSNLPTLILSDTLKKGMKRDFGEVLTKKIIESMSRPSMELVLWKPLPE 92
gi 528479405 141 VEAAQRRLQEIEERITLEDDSdeeeLDVE--PAQRRPVLVMSDSLREGLQRGIGDILPHMVAQSVSRSCMELVVWRPPED 218
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 556959056 275 KYPDKLKEMAEKSKLEKE----QSREVAVAGLT--F-ENcGTQSNYRWNELisAIYNDQSTTGDAEEEMEL 338
gi 620961729  85 ILSDKPKRLSGVKNFPQEtr-kGRAKPGVAGAN--FhQRnELFSEARPAEI--PLYNSLEPAGCTEEEMEL 150
gi 992191218 141 PLTQQLKDSIQRQQRKQQpa-cRQTPAPVPRTP----VPdRLQPKPQPEPAfrSLYCPPVAPgggeeemel 206
gi 973203255  83 VLPRRLKDSM---QRVQQla-aSSSKEPLLVKN--------TDTEAQQHRScsMLYTGPGSQAGMEEDVEM 141
gi 941758821 190 PFCQRLKDSLQK-QRKQQtv-gRQHPTPCSSPS--P-P---LSPSCPPAETcaPMYSFPVLHHSGEEDMEI 252
gi 908503218 184 PFSQRLKDSLQK-QRKQQta-cRQTPTPCPSPS--P-HS-PLNPSSPPADThsPLYSFSVAHNSGEEEMEM 248
gi 694982497  85 ILSDKPKPSSNTKNYIGE----SQAKHAAAGTAfpQ-RT-ELFLEPRQTGM--SLYNSLETAASTEEEMEL 147
gi 823469371  93 FMTDKLKSVS-VKNFKQQstevCQAKQPIPRAPfdP-QT-ETFPGSQQTAMspDPYASLGISGCAEEEMEL 160
gi 528479405 219 PLTQRLKDSLQRQQRKS-----RQTPTPVPSVS----------SPPSHQQTfsPLFS-----NSGEEDMEL 269
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