Conserved Protein Domain Family
SOSSC

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pfam15925: SOSSC 
SOSS complex subunit C
SOSS complex subunit C is a component of the SOSS complex, a single-stranded DNA binding complex involved in genomic stability, double-stranded break repair and ataxia telangiectasia-mutated-dependent signaling pathways.
Statistics
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PSSM-Id: 318196
View PSSM: pfam15925
Aligned: 9 rows
Threshold Bit Score: 83.358
Threshold Setting Gi: 327263669
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259511331   17 ILEEIQT-Kkq----lLAGGIinlglSPPN---------QMPAPQLLGQ-------PTTVN---PDFqagvgIATNatst 72
gi 259511322   17 ILEEIQT-Kkq----lLAGGIinlglSNTN---------QMPAPQLLGQ-------PTTTTa-tPDL-----VSTNst-p 68
gi 259511332   16 ILQGLEEkKrq----mMNQQQ-----GGGAgpl---------------------pgPSHVAr-pPTDagntsASRI---- 60
gi 568254852   16 ILEDIQI-Kkq----lLQKGGnstsaGFAN----------LYTPSSVFSgp---qyAANNTg-aP-LatdgcVNAV---- 71
gi 357617543   17 ILEELQL-Kkq----mLMKQGavaplTATTi--------SLAQPSPVSQlpmcsipPLSATagfPQLpeaniVNTS---- 79
gi 1005970979  17 aLEDVQK-Kqq----lLKQSQlvgqaSVTNnpgt--nqaFIDTNYSINMtnn-----------------nmsLGSN---- 68
gi 196010926   17 ILDQINN-RrafqkdgAAKRPnvrsqGPA-----------SATAHRVPQqqrslrnPPNAGp-pPLIpgnqvESSI---- 79
gi 327263669   18 ILAELDKeKrk----lLMQNQ-----SSTNhpgarilqpLYQT-YELPImktmdpcIsl------------sRSSL---- 71
gi 347963307   15 ILEDIQM-Kkq----lLQKGVnshspGFGNlynsslgfgSLYTPSPLFQlpk--htPATATg-qPnd----sNQSI---- 78
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 259511331   73 ARS-----------------A-------------------FNPTSSTTLGFFIPQDSYFGNSFIPVLPRL 106
gi 259511322   69 PRA-----------------A-------------------FNPTSSTTLGFFIPQDSYFGNSLIPVLPRL 102
gi 259511332   61 HEPivrypnqthqlaisqrqA-------------------LEHAHSVSPGFYITQDSMYGNLILPVIPRV 111
gi 568254852   72 AKA-----------------V-------------------WNQAITQSFGSFIPQDSVFGNCILPVLPRY 105
gi 357617543   80 HRA-----------------A-------------------LQHANATSWGFFVSQDSSFGNQILPVLPRF 113
gi 1005970979  69 NSNqr-------------erS-------------------AYHAHQNTFGYFITQDSAFGNLILPVLPRF 106
gi 196010926   80 RKD-----------------AntshnppapassndqislaLQHARTTTPGYYIGQDSKFGNLILPVLPEF 132
gi 327263669   72 NKDfrdhaeqq-hiaaqqkaA-------------------LQHAHAHSSGYFITQDSAFGNLILPVLPRL 121
gi 347963307   79 SKG-----------------V-------------------WSQAINQSFGFFVPQDSLFGNNILPVLPRY 112
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