Conserved Protein Domain Family
Cuticle_4

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pfam15955: Cuticle_4 
Cuticle protein
Statistics
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PSSM-Id: 318220
View PSSM: pfam15955
Aligned: 29 rows
Threshold Bit Score: 42.1089
Threshold Setting Gi: 170034497
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3121954    55 WPAAVNV----------ASWPPAAIHAAAPAVlaa-----------paP-AVVAAHAPSVVVAPv------AHSGVYTAQ 106
gi 195147312  62 WPAAVTV----------GAWPPAA------------------------P-AVVAAHSPAVVVGPv------AHEGVYTAQ 100
gi 195437612  55 WPAAVTV----------GAWPPAVSHVSHVAApvva---------ahaA-SVVAHAAPAVVVAPv------AHEGVYTAQ 108
gi 195051846  49 VPAAVPV----------AISPAGPVLIQSAPaia-----------hasPiVVAAAPAPAVIAVA-------AAPASYVAK 100
gi 20129323   64 APAAVAV----------HASAAPWGLTGAGWHga------------avP-GINLAQGPGLAAGH-------GHEGVYVAK 113
gi 195437610  55 APAAVAApwngngwnawNGAAAPWGLTGHGWSga------------aiP-GIGLSQGPA------------GHEGVYVAK 109
gi 194759820  61 APAAVAV----------HASAAPWGLTAPGWHga------------aiP-GIALAQGPGLAAAPlag-kllGHEGVYVAK 116
gi 195118128  64 GPASVAV----------QASA-PWGLGPLGWNag-------------iP-GIALAQGPGPAALGp-----hGPEGVYVAK 113
gi 968078911  67 VPAAVPL----------ALSPAGPLLVQSSAGvvtahaagptiiagpgP-AIVSAHAPAIVAAPapvvaiaAPAASYVAK 135
gi 195033059  55 WPAAVSV----------GAWPPAAIHAPLGPAlis----------spgA-VVAAAHAPAVVVAPv------AHEGVYTAQ 107
                         90       100
                 ....*....|....*....|....*...
gi 3121954   107 TRGAIHTAPLAGHIQSVASINAAPAPGT 134
gi 195147312 101 TRGAIHTAPLAGHIQSVASINAAPAPGT 128
gi 195437612 109 TRGAVHTAPLAGHIQSVASINAAPAPGT 136
gi 195051846 101 TRGAVHVAPLPGHIQSAASVNLQPAPGT 128
gi 20129323  114 TRGAIHTAPLAGHINSATSVNVAPAPGT 141
gi 195437610 110 TRGAIHTAPLAGHINSATSVNVAPAPGT 137
gi 194759820 117 TRGAIHTAPLAGHINSATSVNVAPAPGT 144
gi 195118128 114 TRGAIHTAPLAGHINSATSVNVAPAPGT 141
gi 968078911 136 TRGAVHVAPLPGHIQSAASVNLEPAPGT 163
gi 195033059 108 TRGAVHTAPLAGHIQSVASINAAPAPGT 135
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