Conserved Protein Domain Family
TMIE

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pfam16038: TMIE 
TMIE protein
This family of proteins includes the mammalian transmembrane inner ear expressed protein. It's function is unknown.
Statistics
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PSSM-Id: 318294
View PSSM: pfam16038
Aligned: 14 rows
Threshold Bit Score: 105.132
Threshold Setting Gi: 312078392
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 121957344    9 LEHETDLGLRVWHLLFLCFGSVLGIVIMLCCCFRFRIPRTKQDIEADYHRKKLTKKFRERldc-mnnAEIDEMDLMKALE 87
gi 75029285    14 LDQFVAPGLRLWMLIALVGGVLLIMIVIVCCFMRIRIPRTKRQIDLIAAKRKLRKSTKNS-------AEANAHNDERAQA 86
gi 194878933   13 LESVVIAGFRVWHIIAAVLGVLLLIMIMVCCCIRFRIPRTKQEIEADYQRKQITKKFREKlqq-iknSEMDDMDLQKVCA 91
gi 1028700847  24 LELQLYNGYRVWHIIFFIMTVFFTLVVFMCCCVRFRIPRTKQEIEADFVRRKIATKFCKQlrl-lsdTEMDNMDLLKALK 102
gi 189239875   16 IEKAAFNGFRNWHVMFFCFSGLTAIMILICCCVKFRVPRTKLEIEGDYKRKKLAEKFQERlrl-iqkQDMDILDLQQALK 94
gi 1005939109 146 LEKPLFGVFKVWHLVMIGMLIAIIATIVACCIMRCRIPRTKQEIEADAIRKKVTKQFRAHlnk----ipIEGMELIKVLN 221
gi 312078392   16 LDRYVAPGLRLWMLIALVSGILLIMVVIVCCFMRIRIPRTKRQIDLIAARRKMRKSILSS----------ERLPDEKAQP 85
gi 746843315   34 LENEALPGFRIWQLAGIVLSVLLSIVVGLCCCIRFRVPRTKQEIEADYIRKKITKSFRTElsk-isnTEMDEMNLQKALD 112
gi 926506745   35 SETVVIWGLRLWQVIGIFAIFVLAVIITLCCIFKCRIPRTKKEIEARYAQRQAAKTYADKletvpplNELTEIPGAQVAE 114
gi 357620932   17 LEKRIIGELRLWQIMFLCLAGVTSLIVIVCCCFRFRIPRTKQQIEADYKRRKITSKFRQQlet-iqdSKMDTISLKDALE 95

                  ....*.
gi 121957344   88 RVREEC 93
gi 75029285    87 IVMNSM 92
gi 194878933   92 RIQSDY 97
gi 1028700847 103 RLQSEL 108
gi 189239875   95 LIQEDF 100
gi 1005939109 222 EVKEYe 227
gi 312078392   86 IVMNKV 91
gi 746843315  113 RIRNEH 118
gi 926506745  115 EKKEEV 120
gi 357620932   96 LLHEKT 101
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