Conserved Protein Domain Family
Keratin_2_head

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pfam16208: Keratin_2_head 
Keratin type II head
Statistics
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PSSM-Id: 318448
View PSSM: pfam16208
Aligned: 50 rows
Threshold Bit Score: 41.184
Threshold Setting Gi: 0
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81891716    21 NFSSGSAGLv-----SFQRRSTS--SSMRRSgGggggrfsgggfcgSSGGGFGSKSLVNLGGGRSISISVAGG------- 86
19_pfamImport   1 SFSSCSAMTp----qNLNRFQASsvSCRSGSgFrg-------------lGCFGSRSV-NFG---SSSPRIAVGcsrpiry 59
2_pfamImport    1 NFSSCSAMTp----qHLNRFRASsvSCRSGPgFrg-------------lGGFGSRSVINFG---SSSPRIAVGcsrpiry 60
8_pfamImport    1 NFSSCSAMTp----qNLNRFRANsvSCWSGPgFrg-------------lGSFGSRSVITFG---SYSPRRAAVgprpgrc 60
17_pfamImport   1 NFSSCSAMTp----qNLNRFQANsvSCWSRPgFrg-------------lGSFGSRSVITFG---SYSPRIAAVgsqpvrc 60
5_pfamImport    1 NFSSCSAMTh----qNLNRFRTSsvSCRSGPsFrg-------------lGGFGSRSVISFG---SCSPRIAAVgprpirc 60
1_pfamImport    1 NFSSCSAVNp----qNLNRLRASsvSCRSGPsFrg-------------lGNFGSRSVMAFG---SCSPRIAAVgprpirc 60
33_pfamImport   1 SFSSCSAVTp----qNLSHFQASsvSCKSGPgLrg-------------lGAFGSRSVINFG---SHAPRMAAVgphptrc 60
29_pfamImport   1 NFSSCSAGSp----qNLNHFRAGsvSCRSGSgFrs----------lGSFGGFGSRSVVNFG---SYSPRMAAVgpcpvrc 63
47_pfamImport   1 GFSSCSAIGggfgggSRSRSSYSsySVSRGFgGg------------GRCGGFGSRSLHSMGGSARMSMGGCYGgr----- 63
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81891716    87 GSS-YGGGfGGGSy-------gGGSFGg-gSF--GGGVG-GGFGG-Gg---------fGGGGFGSg-GGFGG----GRFG 139
19_pfamImport  60 GVGfGAGNgMAFGs--------GDGCGvglGFraSSGVG-LGFGAgSslg-----ygfGGPAFGG--PGFGYr--iGGIG 121
2_pfamImport   61 GVGfGAGNgIAFGs--------GDGSGiclGYraGSGVG-LGFGAgSclgygfggpgfGGPGFGG--PGFGYr--iGGIG 127
8_pfamImport   61 GVGfGAGCgMGF----------GDGRGvglGPgaGSCVG-LGFGAgSgi----------gyGFGG--PGFGYr--vGGVG 115
17_pfamImport  61 RVGfGAGCgMGF----------GDGRGvglGPraDSCVG-LGFGAgSgi----------gyGFGG--PGFGYr--vGGFG 115
5_pfamImport   61 GVGfGVGSgMAFGy--------GDGSGaglGFgsGSCVG-LGFGAgSgl----------gyGFGG--PGFGYr--vGGIG 117
1_pfamImport   61 GVGfGAGSgMAFGf--------GDGSGaglGFgpSSCVG-LGFGAgSgl-----------------gyGFGYr--vGGIG 112
33_pfamImport  61 GVGfGPGSrMAFSf--------GDRSGvglGFraCSGVG-LGFGGgSgf----------ghGFSG--PGFGYr--vGGIV 117
29_pfamImport  64 GAGfGAGSaMGLGf--------GGGSGvglGFraSSGVG-LACGAsSgl----------gyGFGG--PGFGYr--lGGIG 120
47_pfamImport  64 ----mGGFgGSYGglgsfgggmGGGGGgmcGF---GGMGgGGMGGgG-----------GMGGFGGgmGGFGGgmggGGMG 125
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 81891716   140 gg---fgPVCPPG----GIQEVTINQSLLQPLNVEVDPQIQKV 175
19_pfamImport 122 -------GPSAPS-----ITTVTVNQSLLTPLNLEIDPNAQRV 152
2_pfamImport  128 -------GPSAPA-----ITAVTVNQSLLTPLNLEIDPNAQRV 158
8_pfamImport  116 -------VPAAPS-----ITAVTVNKSLLTPLNLEIDPNAQRV 146
17_pfamImport 116 -------VPA-PS-----ITAVTVNKSLLSPLNLEIDPNAHRV 145
5_pfamImport  118 -------VPAAPS-----ITAVTVNQSLLTPLNLEIDPNAQRV 148
1_pfamImport  113 -------VPAAPS-----ITAVTVNQSLLTPLNLEIDPNAQRV 143
33_pfamImport 118 -------GPAAPS-----ITAVTVNQSLLTPLNLEIDPNAQRV 148
29_pfamImport 121 -------VPAAPS-----ITAVTVNQSLLTPLNLEIDPNAQRV 151
47_pfamImport 126 gfggpgfGMGGPGrggpGIQPVQIDTTLLRPVHVEIDPQIQQV 168
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