Conserved Protein Domain Family
DUF4927

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pfam16279: DUF4927 
Domain of unknown function (DUF4927)
This family, around 80 residues, consists of uncharacterized and nuclear receptor coactivator 2 proteins and is mainly found in mammalia species. The specific function of this family is still unknown.
Statistics
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PSSM-Id: 318508
View PSSM: pfam16279
Aligned: 15 rows
Threshold Bit Score: 100.214
Threshold Setting Gi: 556967513
Created: 31-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 218527809   725 KQEPVSPKK--KEHALLRYLLDKDDTKD-NVADITPKLERPDVKVEPTSCPK--------LLSVK-A--EKEEPSFGHSD 790
gi 982264966   614 KQEPVSPKK--KENALLRYLLDKDDTKDiGLPEITPKLERLDSKTDPASNTK--------LIAMK-T--EKEEMSFEPGD 680
gi 973197407   806 KQEQPSPKK---THALLHYLLN-NDPKEp--ADIKPKLEELEGKTQQNACSS--------SGLMP-StpENGENKIKTEQ 870
gi 556967513   734 KQEPGSLKR--KENALLRYLLDKEDH----SPDLNPKLERMDSKTDPSGNIK--------LSTVK-V--EREESE----- 791
gi 326671802   795 KQEQHSPKEgkKPQALLHYLLNKDDSKEpGATEVKPKLEELEARGASGGQGA--------GVTTSsS--SNQESKVKLEQ 864
gi 941786618   829 KQEQHSPKKe-KTHALLHYLLNKDDSKEq--TDVKPKLEDLEGKCLPGAGGG--------GGGGPvA--EHAESKIKSEP 895
gi 554831336   819 KQEQHSPKKe-KTHALLHYLLNKDDSKEp--VDVKPKLEELDGKGPVGAAGGpprsipgsGPGPV-P--EHPESKIKSEP 892
gi 1019026324  562 KQEPVSPKK--KENALLRYLLDKDDSKDvGLPDVGPKPERLDGKADPAGAPK--------LLALK-V--EKEEVGYEPGD 628
gi 637297997   720 KQEQMSPKKk-ENHALLRYLLDKDDAKDsLSKDIKPKIECLDSKMGQCCNSA--------IPTS--S--QEKEMKIKTEP 786
gi 821459511   720 KQEQLSPKKk-ENNALLRYLLDRDDPNDsLSKDIKPKVEGGDTKMGQCSTSS--------ISTS--S--QEKEIKVKTEQ 786
                           90       100
                   ....*....|....*....|..
gi 218527809   791 QLMPPGSDlDNLDEILDDLQNS 812
gi 982264966   681 Q---PGSElDNLEEILDDLQNS 699
gi 973197407   871 PDELH----DTLETILGGFRNS 888
gi 556967513   792 -----TLV-SELDEILDDLQNe 807
gi 326671802   865 PDEL-----ESLESILGGLRNp 881
gi 941786618   896 PDDL-----HNLESILGDLRGS 912
gi 554831336   893 PDDL-----HNLESILGDLRSS 909
gi 1019026324  629 Q---PGSDlDNLDEILDDL--- 644
gi 637297997   787 TEEMSGDLvDNLDAILGDLTNS 808
gi 821459511   787 NEEVSGDL-DNLDAILGDLTSS 807
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