2X8S,3LV4


Conserved Protein Domain Family
GH43_C

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pfam16369: GH43_C 
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C-terminal of Glycosyl hydrolases family 43
This is the C-terminal of Glycosyl hydrolases family 43. It is around 100 residues in length from various Bacteroides species. The function of this family is unknown.
Statistics
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PSSM-Id: 318566
View PSSM: pfam16369
Aligned: 75 rows
Threshold Bit Score: 90.3142
Threshold Setting Gi: 524223628
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2X8S_B         364 PYRYAGETLkeVKQKDITGTYKLIQHGKDI---------SAD---IKQTINIQLNKNHT-ISGE-M-T----GTWRK-TG 423
gi 505140268   346 PERFAGEELqkVPQQEVVGDWEIIIMDPDR---------N-K---QLQAENLKFLENGK-ITGE-IgS----GSWHQvD- 405
gi 505207180   363 sERYAGEKEqkIEKEAIVGKWQLIVQDKNI---------NT----MISSVEYDLSSNGK-LKNE-K-Ts---GKWKL-EG 422
gi 501579747   363 PERYTGEIIqeVPQELVIGTWERIVLD-PY---------DKV---QSQSKRLILQKDGTfVFGD-R-K----GTWEF-TS 422
gi 256686377   380 PMRYAGETTerTVSEHVVGTWQLINHGTDI---------NTT---ATKSSTYTFRSGGT-ITSG-T-GttsvGSWRI-TS 443
gi 500266203   374 PERYAGEKEqvLSKDLVVGSWERIVLD-PY---------DYL---QSEPVKITLLKSGK-INSEnS-S----DFWTFiS- 433
gi 505077268   376 PQRFANLERttVTRDALVGSWEQIVLGYQVvpgfaaeqtDPN---LQVSYEIRLHADGT-IGGE-S-A----NKWSYdA- 444
gi 1033478123 1864 PERYAGEQEqkIDQSLIAGKWQTIVQNRLN---------NNK----LTSTDITLYANGK-INDEnG-Q----SFWKL-TG 1923
gi 500027887   436 PERYAGVPDteITKAEIVGTWEGITLEYQY---------RS----MQTSYDVIFRADNS-LGGG-L-D----GTWSLdAD 495
gi 749078546   349 PERYAGEKEqdIPKRLLSGNWERIVI-------------RQEvdgQVEAEPLRLEDGGR-ATSGsL-E----GHWSF-DG 408
                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
2X8S_B         424 KNTADITL-------AG-----K----K-YNG------V-FLRQ------WDSVRE--KNVMTFSVLNTSgEAVWG 467
gi 505140268   406 DYSLKFNLvvn--krEK-----N----N-YQV------K-MISA------WDWENW--NPTLVFTGLNQDgVAIWG 454
gi 505207180   423 DDDITVEI-------PNsngesV----E-YTG------K-VMPS------WDWENN--KQTLIITALDKKgVSLIG 471
gi 501579747   423 PNNLSLIWr-----dSN-----E----K-ENL------L-VLAS------WDWENW--RPTLVFTGLNSRgIAIWG 468
gi 256686377   444 RNTADITL-------AG-----T----T-YNG------V-YTPV------FDPQYN--SWSYGFTALSSTgTALMG 487
gi 500266203   434 PNTIKLNWc------KG-----K----T-KKVyevetvK-VIPA------WDWENW--KPTLVFTGLSNKgIAVWG 484
gi 505077268   445 -PWLTLNY-------G--------------NG------I-FIDQvivhngYDWENH--QETLLFTGLNNEgTAIWG 489
gi 1033478123 1924 DNTLTLNYydpgkapGD-----Y----W-VDT------VkVLPA------WDYENW--KPTLVFTGYNQAnTEVWG 1975
gi 500027887   496 SG--ILTI-------NG-----N----D-F--------I-VDTA------WDWEASprEETLTYAGIASSgASIWG 537
gi 749078546   409 RRTLTMNW--------------SnaseGsKEEv-----L-LLPS------WDWELG--RHTLIFTGMNEKgISIWG 456
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