Conserved Protein Domain Family
DUF4998

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pfam16389: DUF4998 
Domain of unknown function
This family around 200 residues locates in the N-terminal of some uncharacterized proteins in various Bacteroides and Parabacteroides species. The function of this family remains unknown.
Statistics
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PSSM-Id: 318580
View PSSM: pfam16389
Aligned: 26 rows
Threshold Bit Score: 199.425
Threshold Setting Gi: 81443769
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8A3N7        20 CDGMDATYKEFIEEGPIVYIGKV--DSLKAYAGRNRAMLEWQKLLDPRAKTAKIFWEN----------------R----T 77  Bacteroides the...
Q8A3I9        20 CESMDATYKDFVKDGPIMYLTRLskDSITVRNGWERVLISFPIVKDGRSTKIALALNQ----------------S----- 78  Bacteroides the...
ACU04761      21 CKKMDEVYKDFIVPGGLTYAGRV--TSPVIQSGRQRIKISWLRGADPNVNLARIFWNN----------------Y----K 78  Pedobacter hepa...
WP_012780881  23 CEKMDATYKDFLNGGEIVYNGKP--ELLQVFSGNKRVKLKWYIVSDPKITSAKIYWNNpahiegepvipgqrpaG----R 96  Pedobacter hepa...
AEW01631      23 CSKMNATYEDFIKDGEVVYIAKV--DSVTAYPGNNRMALSMLLTSDPRISKVKVYWSA----------------G----G 80  Niastella koree...
WP_036674984   5 CKRMDSTYEKYVVPNGIIYPGKA--TSPSVKPGLNRIQISWARGTDPKVVKARIFWNN----------------Y----R 62  Pedobacter hepa...
WP_013634633  23 CQKMDGIYEDFLEGGEIVYNGKA--EGLVAHPGINRMELKWYIISDPKIVKAKVFWINpvhiegeptlpnqraaG----K 96  Pedobacter saltans
CDC97660      20 CKDQDDIYKQWVVPGGSVYPEKA--NGLNAKLGYKRIQLRWATPKDPSVTKAVITWDN----------------G----D 77  Prevotella sp. ...
CDA76753      16 CENMEDVHKKYIADGEIIYRVKP--TTIKSYSGYNQAKLTWNLVCPKLVTQCRIEENN---------------------- 71  Bacteroides sp....
WP_008586568  21 CTRSDEYYRDYLKNGEIYYPGRI--DSLSIIPGDRKAVLRFRMTTDPKIQTIKAFVRN----------------SlspnQ 82  Niabella soli
Q8A3N7        78 --RSTELQLT-DKA--GLTQVIVKDLAEGSYVFEVCTYDTHGNSSIMSEVPCTVYGDVYEKLL-FNTKVKTAVL---K-- 146 Bacteroides the...
Q8A3I9        79 --DTVRYELA-KNK---RTDILLENMREGSIIFSAWLEDDELNKSLATDFTGTIYGTQYQSYL-LNRSIVSKSM---Q-- 146 Bacteroides the...
ACU04761      79 --DSVNVPIP-ATG--DTISVIIGNLEEKPYTFVARTYDNKGNKSVPVELLAESFGDKYQSFL-VTRPVVQSEN---S-- 147 Pedobacter hepa...
WP_012780881  97 --DSVVLAIQ-RGSgtDSVQTFIDRLKEGIYTFSVFMYDDKGHSSVKSEVIGDVYGDNYQASI-TNRPLDMPQL---Nil 169 Pedobacter hepa...
AEW01631      81 qtDSTEKAVQ-RTDnvDTVRFSFNKLAEGTYTFNIYSYDKAGHRSVKNDVIGTVYGDRYISQL-VNRAIKSSAY---S-- 153 Niastella koree...
WP_036674984  63 --DSVEVPVP---AdqDIISYTIPNLAENYYTFIIKTYDKDGRVSVPVEVSGDVWGERYRSTL-LNRLAVSSTI---Nl- 132 Pedobacter hepa...
WP_013634633  97 --DSVTIDIV-RGAttDSVITLIDRLKEGVYTFSVVMYDKNGHSSISSQIIAEVYGSVFQGTI-SNRPLDVPLL---Dti 169 Pedobacter saltans
CDC97660      78 --QTKELNYA-DYAgqDSIRLEIDQLKEQSYTFNIVNYDKEGNQSMQSENTASPYGDIWLATH-SERTIKSAEI---Ps- 149 Prevotella sp. ...
CDA76753      72 ---SLLAELHvVYEdtVRMECILNNLEEKTHTFSIYTLDAEGNTSLKSEIIVDVYGAKYEANLrTNISLKSVWRkadN-- 146 Bacteroides sp....
WP_008586568  83 --TVLTFPVT-QGDygKIKEYALDNLEEATYTIDIRTFASEKDSSRAVTASQFIYGQSYISTL-TNRSFLKFAG---P-- 153 Niabella soli
Q8A3N7       147 --N--DVLTITFAASLE-PTfF----------G-SEITYTSIDG-GDKTV---ILKA--P------------E------- 185 Bacteroides the...
Q8A3I9       147 --S--GNLVIKYSMLLD-STlV----------A-SRLTWNKGGE-ETTKI---SYYN--K------------E------- 185 Bacteroides the...
ACU04761     148 --G--TVLTINWSNANK-SGgA----------YvTEVEYTNTAN-VTAVK---RFSV--D------------E------- 187 Pedobacter hepa...
WP_012780881 170 ngK--SDLYIPWYGVAQ-QA-V----------R-IDLIYTNTAG-QVKTVqkkKIPN--P------------Adarrgmi 219 Pedobacter hepa...
AEW01631     154 --DaaQTATIKWYGVGA--DvI----------G-QEILYTDNFG-AQQKF---YSKNegP------------A------- 195 Niastella koree...
WP_036674984 133 --A--NTLTIQFEPVLAgSTiV----------K-SEVEYTTTAG-ALKTV---TVLP--G------------T------- 172 Pedobacter hepa...
WP_013634633 170 nkK--SNLYIPWYGISQ-QA-V----------K-IDLQYIDVSG-IARTK---RITK--VsnpidprrpmiwQ------- 221 Pedobacter saltans
CDC97660     150 --G--TNANITLDFGTN-EM-V----------A-TKFRYLNNDGeWVVTD---PVPS--N------------V------- 188 Prevotella sp. ...
CDA76753     147 --S--NQVLIGLSEQSS-SKvV----------K-TRVYYKNVDG-KEAMQ---EVKT--G------------E------- 185 Bacteroides sp....
WP_008586568 154 --D--ATVNVPYAVFAR-EPnLprlgnfypmqF-TEVNYVTTIG-DTVTV---RITP--Y------------E------- 202 Niabella soli
Q8A3N7       186 --TQIKIDDFA---GDRIIYRSVYLPEETAIDYF 214 Bacteroides thetaiotaomicron
Q8A3I9       186 --GQDVLEDFT---GDSFIMETLYAPQENVLDKi 214 Bacteroides thetaiotaomicron
ACU04761     188 --LSSVISDYKp--GTTYRYRTEYRPG-ASIDPF 216 Pedobacter heparinus DSM 2366
WP_012780881 220 wlDRDTLFNFKdapGAKVRYRTAYLPEETAIDTF 253 Pedobacter heparinus
AEW01631     196 --DSTVLPVYKk--GSSLQFRTLYKPAPNAIDTF 225 Niastella koreensis GR20-10
WP_036674984 173 --LSLQLTDYKk--ETGYKLRTQHL-NPTAIDPF 201 Pedobacter heparinus
WP_013634633 222 --DRDTVFNYKe--GTGFSYRTAYLPEPNAIDTF 251 Pedobacter saltans
CDC97660     189 --ASVVLENAKv--GTRYEYASGYCPV-AGLDTi 217 Prevotella sp. CAG:474
CDA76753     186 --KEIVLEQVAe--DSYFKLQDVYMPVENCIDEF 215 Bacteroides sp. CAG:530
WP_008586568 203 --EVAQMGGIKn--PSIIKYRTVYKPTPTVIDYF 232 Niabella soli
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