Conserved Protein Domain Family
DUF5013

?
pfam16405: DUF5013 
Domain of unknown function (DUF5013)
This small family of proteins is functionally uncharacterized. This family is found in various Bacteroides and Parabacteroides species. Proteins in this family are around 400 amino acids in length.
Statistics
?
PSSM-Id: 318590
View PSSM: pfam16405
Aligned: 19 rows
Threshold Bit Score: 136.347
Threshold Setting Gi: 524138555
Created: 31-Jul-2016
Updated: 4-Aug-2016
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81443633  260 KNAGYPFR------GYD----V-NNKWGKP-YDWKWNEVMETKNA-N----------GGag-----ftEYNDGTIQFET- 310
gi 81443846  237 KNYKRPFE------GRDk--nA-DNKWGIL-VDWDFTPNILNQSN-Gk---------GGws------eDWGNYSIHLES- 289
gi 503986039 241 SNCGPDFK------GQLg---S-DGRFGTLnAPWVTNAGAMNKGS-Gt--------yGGyqh----agWQSNGVITWET- 296
gi 495028686 220 KNYKQPFA------KASeeswK-NGEWWTP-ADWIQNAVSFNADGsTt--------vSGmq-----ykAAEGYTLAFQH- 277
gi 524325805 310 KNYKAPFTpkpfedGQGg---N-NNSWAVP-ADWTVNEAVQNMFN-Kq--------dGQfcskpvgglNTDAQVLTMQA- 374
gi 495784294 204 QNPGNNFI------ASSm---DaGGRWGTL-ASWTTNAAALSHNG-K----------GGya------tDGDGINMDLES- 255
gi 502449374 245 KNPGDPFY------RSDn---G-TGKWGLP-RDWQVNANARNQNN-Dq--------gGGws------tD-NGGCIHFESk 297
gi 752699005 263 lNNIHPVA------NRAn---D-GSRWATL-RDWISNDAAQTHNT-Ngv------nyGGt-------dISGDAKIYFEA- 316
gi 524329652 482 ENCGTPFS------RTEdp-lD-DNVWGIP-TGWKFNDKFYYEEN-DrkvlirtllvDG---------NNPEGAISLLC- 541
gi 502836128 218 ENAAIPFK------ASS----K-SGRWGIL-ENWTTTEPVLVHGG-Y----------GGwd-------eWNGNIFNIESg 267
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 81443633  311 TqWSQG----YYD------NGKIWQTFT--LPEGKYEMRIEVKNAANIGSGstniHFAVAQGES-LPDNEE--------- 368
gi 81443846  290 KdWDGE----GIT------NGKVYQSFE--LPAGNYQLECELEGGSNGMNG----YLAASRGSV-LPDIDR--------- 343
gi 503986039 297 --WGNT----PVV------DGRIYQPTSspLPAGSYTVSFTYYSEVQQNSsl--yFVAAAGGSG-IPSLSN--------- 352
gi 495028686 278 G-WNKK----QYA------NGKMYQQVK--LRPGTYRLEVTYAYTKVLDGNfvaaFIVKGTEENdIPDTDQ--------- 335
gi 524325805 375 G-WNND----AVEaakvmtNGKMYQNIT--LPKGSYEMVVTYGEVVVNGGHp---YMAVCKNKTeLPNYGE--------- 435
gi 495784294 256 G-WGSP----QIL------NGKIYQTIT--LPAGSYTFDIAPFVWQGTKDv---aYVVVAPNSTsLPDYSA--------- 310
gi 502449374 298 N-WGDA----PLV------NGKVYQSFT--LPAGTYDLDVV---TAGNGGSmd-aNEVVATGTT-LPDIDN--------- 350
gi 752699005 317 G-WGAP----GIT------NGKIHQVCT--LPPGNYSFEGEVDWWAVGSKNds-yLVAAAGANG-LPDVSG--------- 372
gi 524329652 542 NeWANAnhkhALE------NAKMYQITT--LPAGTYKLSFTVSESNTLGGNfgviFGITKGSST-LPDLNNgtwdpvses 612
gi 502836128 268 --WGAS----AIN------NGKIYQTVPg-VQEASYVLNVLIRNTNHQLSDpggsYFVVAKGST-LPDVSD--------- 324
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|
gi 81443633  369 --L--EK--SDIILSYLKFEse-----hTNKTSALpIFELTE-EKTITVG 406
gi 81443846  344 --Lk-EE--ALGYSQYGDSN--------MGGKHTL-TFSLAE-PATVSVG 378
gi 503986039 353 --L--SS--ALGYAALFNGAnigatspnITETKSF-NFTLST-PQVVSLG 394
gi 495028686 336 --V--AT--LDGTKGVYASYktstvdgaSGQLVTA-SFNLEG-ETDVLIG 377
gi 524325805 436 --L--SEvnGDVYWKFEGHNs-------SLTTHTL-NFELTE-TTDVCLG 472
gi 495784294 311 --IpgNT--GINYAPFTNSAv---------------SFKLTA-STQVTVG 340
gi 502449374 351 --LsgNS--AVLALFHGDGGsi-----gGThtltftltqqttvtfgwvvs 391
gi 752699005 373 --L--GT--AISYKRVDNGSraictftltqqttlslgllldlasdgeamr 416
gi 524329652 613 dfI--EK--TDGDKSYIKVSdnkvlraeGPKSFDM-TFTLSE-RTEVTIG 656
gi 502836128 325 --V--ET--AEEVLAYKRINvd----lgSEYTYRL-EFTIDEgATDITVG 363
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap