Conserved Protein Domain Family
HIGH_NTase1_ass

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pfam16581: HIGH_NTase1_ass 
Cytidyltransferase-related C-terminal region
This domain is found as the C-terminal portion of some HIGH_NTase1 proteins. The exact function is not known.
Statistics
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PSSM-Id: 318728
View PSSM: pfam16581
Aligned: 7 rows
Threshold Bit Score: 276.232
Threshold Setting Gi: 74553698
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74509875  138 RPIPGFEEVLRRINLGHRVVPRPHRIVDLDKGETLLKgPLEEDNYVITSLARALGKLG----------FDFRGKFIFVER 207
gi 74553698  143 IEEETMERVINSINNGNHIKIKPYNISCIETREKLGE-KLEIDNYVIASMSYTIYKLKen-------fPKWNPKFKFIER 214
gi 503178872 130 KPAPNFNKILKRINDGHIIVPKPYKIIDTTTNEILLEdPLEEDNYVIVSLSKSLGKIG----------FNFKNKFIFVKR 199
gi 500588781 135 KEVPNFDLIMDRISKGHWVAPKPYKIIDKTVNEVLLRdKLEEDNYVIASFSNSLSKIN----------FDYENKFIFVKR 204
gi 851339022 136 IDEQTMNKVISCIIDGHHIKIKPYKISCIETGEVLGE-KLEIDNYVIASMSYTIYKLRkl-------lNNYEPKFKFIER 207
gi 500684378 151 IPEKTMDKVINCINAKNHIKVKPYKIKCMETGELLGE-KLEIDNYVIASMSNTIYKLNnkwnsknnsnIKFNPKFLFIER 229
gi 502721716 159 RPFDGYDEILKRISMGHGVAPKPYKIVDMDTKETILEgKLEEDNYVIVSFSKSLKRIG----------FDFKDKFIFVPR 228
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74509875  208 IGGVSGTEIRRAVSD----GDLQRVAGMLPPETMDVLSEEIEAgrapLHDM---RLEDEIIRNASEPGMDElmdlnLFDE 280
gi 74553698  215 IEGISGTKIREGVFN----NNFESIKHMLPITTIDVFKNFGDN----LSEIilkRNEEMVLDTVNNFDLNK-----YLPE 281
gi 503178872 200 ISGVSGTKIRNAVYK----GKLESVKDMLPEETYKVLKEELRAgrapLY-----RNEEKILENANTLNYEEllnlnLIDE 270
gi 500588781 205 IEGVSGTLIRQSIVE----NNFDKVKDMMPDKTIEVLKHEIANdn-lIYNV---RDEEAILNTANTFDFDTlaslnMFNE 276
gi 851339022 208 IEGISGTKIREGIYGkkygGNFDILRKMVPDTTISILENLFKNy--dMDEIilkRYEDRILDIVND---DKydirqIIPE 282
gi 500684378 230 IEGISGTKIRENIFN----GNFKDIGDMLPETTINILKKYN------IQDIilkRFEDRILETVNEYELNK-----YVPE 294
gi 502721716 229 IEGVSGTLIRKACSE----NKLEDVESMLPPETLRILKRELDNdnapLHDQ---RDYEVILNSANNLSYDEliklnFFSE 301
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 74509875  281 VTASAL-IRGR---PYMTLREVEEAIPPSFSRHHRQRILSVLEAKVHKGLVHKYIENYPSVIRILG 342
gi 74553698  282 NISEKL-NEKE---YYESIEEIKEYIPRGFSKNNIERTISKLEARIEKETISKYIENYPANLRILN 343
gi 503178872 271 KTAKKL-IANR---PYKSIKEIEKAIPAGFSTHHKQRILSVLEAKIDKDTISKYIENYPATIRVLG 332
gi 500588781 277 RLANTI-FNNA---PFDNVDEVQKVIGRGFSTHFSERILSILEVPISKKVISEYIENYPAKIRVLD 338
gi 851339022 283 KMANAVySRSN---YYESVEEIKKALPYGFTKNSNERILTKLEAGIKTEDISRYIDNYPQNIKILE 345
gi 500684378 295 KLANLL-EQYR---PFNTIDEIKEKLPYGFSKHYKERIISKLEARIEEDIISKYIMNYPSKINILG 356
gi 502721716 302 KLANEF-IEKRenkEFESISEIEDAIFYGFSSHYKNRVLSILETQMRGDVISNYINTYPFNVRVLN 366
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