Conserved Protein Domain Family
zf-C2H2_assoc2

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pfam16624: zf-C2H2_assoc2 
Unstructured region upstream of a zinc-finger
zf-C2H2_assoc2 is a short region of natively unstructured sequence immediately upstream of a C2H2-type zinc-finger on eukaryotic Zinc-finger proteins 592 and 800. The function is not known.
Statistics
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PSSM-Id: 318765
View PSSM: pfam16624
Aligned: 7 rows
Threshold Bit Score: 58.4209
Threshold Setting Gi: 637303678
Created: 31-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 556972045  432 AKEEKRPNNVASNTEIKVKLEvpdA---ANHIES--SSSPITHSPQNEVKNINQTHEKK--STS---------------- 488
gi 972983339  450 TKLENGSAPAPSSAEIKVKTE---P---SDTVEHhnESTPVSQSPQSETKGGGQAIEKK--STP---------------- 505
gi 188528939  422 CKQAKERNHAAN-ADVKVKTE---S---LNTVEP--STITVSNSSNSELKGAHSANEKK--SIP---------------- 474
gi 941778712  531 NTPSTGSTNVSLSNNVRVKQE---AvepSDEDDDidSSPAPSLSNNN-------GTSKG--VPQ---------------- 582
gi 224093499  394 SKREKGPNSTTNGTEIKVE-----P---AASVEP--SLPSIVLSPQNELKGTNHSNEKK--NTPsaqknkvrqdpenpks 461
gi 927216649  294 SKREKGPNNTANSSEIKVKVE---P---ADSVES--SPPSITHSPQNELKGTNHSNEKK--NTP---------------- 347
gi 637303678  887 akkkcaasakkkcaasskkkcaasakkkcaasakkkcaassrkkgtvsaekksaacveKkrATP---------------- 950
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 556972045  489 ---------TTQKIKTKQEQESPK-LSSPPA--------TGGQQKIRKPKLSVGFDFKQ 529
gi 972983339  506 ---------TVPKSKIKQESDSPKsSSPTTT--------ITTGQKGRRPKLSVGFDFKQ 547
gi 188528939  475 ---------AAQKSKAKSDAESPK-ASP------------GDKKKFKKPKLSAGFDFKQ 511
gi 941778712  583 ---------AVLKVKEEEAPSSPK-VPSSTSssssrggnTCTNMAAKLSKLSVGFDFKQ 631
gi 224093499  462 tsksttkssTKSTCKSTTKS-TPK-STNASA--------AGGQQKTRKPKLSAGFDFKQ 510
gi 927216649  348 ---------AAQKNKVKQDSESPK-STSPSA--------AGGQQKTRKPKLSAGFDFKQ 388
gi 637303678  951 ---------T-KRNNVKQNSENVK-RSGQNL--------VACPKKPRKPRLTPGFDFKK 990
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