2L8T


Conserved Protein Domain Family
SAPIS-gp6

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pfam16722: SAPIS-gp6 
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Pathogenicity island protein gp6 in Staphylococcus
SAPIS-gp6 is a family of proteins produced from the pathogenicity island SAPI1 in pathogenic Staphylococcus aureus. This is a mobile genetic element that carries genes for several superantigen toxins. SAPIS-gp6 is a dimeric protein produced from the pathogenicity island with a helix-loop-helix motif similar to that of bacteriophage scaffolding proteins. It is thought to determine the size of the capsids of distribution of the SAPI1 genome as it acts as an internal scaffolding protein during capsid size determination.
Statistics
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PSSM-Id: 318846
View PSSM: pfam16722
Aligned: 4 rows
Threshold Bit Score: 63.2181
Threshold Setting Gi: 488436650
Created: 31-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
2L8T_A        1 ETKYELNNTKKVANAFGLNEEDTNLLINAVDLDIKNNMQEIS----SELQQSEQSKQKQYGTTLQNLAKQNRIIK 71
gi 446370915  2 ETKYELNNTKKVANAFGLNEADTNLLINAVDLDIKNNMQEIS----SELQQSEQSKQKQYGTTLQNLAKQNRIIK 72
gi 446370920  2 ETKYELNNTKKVANAFGLNEEDTNLLINAVDLDIKNNMQEIS----SELQQSEQSKQKQYGTTLQNLAKQNRIIK 72
gi 488436650  2 EFNYSIESTEKAAKVLKLSAEDKQALIEAVNEDFKQNMTEVAklknKEARENKQETKQEQQQSIIKMARNARVIK 76
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