Conserved Protein Domain Family
Pilin_GH

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pfam16734: Pilin_GH 
Type IV pilin-like G and H, putative
Pilin_GH is a family from Cyanobacteria. All the proteins are putatively annotated as being general secretion pathway proteins G and H, and are likely to be pilins of the type IV secretory pathway.
Statistics
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PSSM-Id: 318856
View PSSM: pfam16734
Aligned: 48 rows
Threshold Bit Score: 73.5049
Threshold Setting Gi: 501592154
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123056650  55 SEAKQYIASIAKGQQAYYAEKGTfITaiADIG--KLG----L--GIRTG-T-NNYTY----E--------L----VGTT- 107
gi 503088239  60 pQPKNHLGAFNRAQQAFHLENGQ-FA--DSLT--QLQ----L--YRLDQiD-QNYQYhwlsS--------M----IPGD- 114
gi 504042247  35 draplmMKAIALGQQTYYQNQGY-FA--NSLQ--GLS----G--HLNLE-T-DSYQY----A--------I----KTEGe 85
gi 497453613 254 AEAERYLAQMNKAQQAFYEANQR-FA--STLE--ELE----RsaSIISH-S-SHYVY----R--------L----VIRD- 305
gi 501111264 136 dtGHTYLGNVLRSQQAEKLVTGR-FT--TNLQ--KLE----S--DSPKD-S-GEFQL----Q--------V----LEAN- 185
gi 493669875  49 arevltdllqNQSQQLFH--YNR-FT--DNLD--ALY----R--TTSEG-R-PGYNF----A--------I----NV--- 94
gi 504955248  55 tEGKNGIGTINRAQQAYHFEKQS-FA--SALTdaNLAsnniL--GVTVD-S-QYYSF----S--------T----N-AG- 109
gi 501598405  61 kQAKTKLQDLHEIQQKHRRQQGT-FA--YSLN--HLP----N--SKHLL-TsPSYTF----S--------IlspmIPST- 115
gi 503089202  48 AEALSTLGLINRAQQFYKFEHST-FT---SLN--NLS----I--SIGSD-N-GNGTY----SaqyyifsdT----NIES- 104
gi 501592154  55 SEAKSFVGAVNRAQQGYYTENAA-FA--GTLG--D------V--EVPAG-T-PKY-Y----S--------F----PTTL- 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123056650 108 AGAg---------GVNAWT---KN---AA---QGL-KYYAGLIYLTQAS-GALTSETALCESGDQSKDAA---TNQ---- 160
gi 503088239 115 NNNndrkf-ihskFMMAQP---VP---EW---SGYhKTYIGAVFFDTNK-EE--FVTGICGMDQVKTLPK---TVP---- 174
gi 504042247  86 TAQ----------TVFITA---TA---KT---DDL-RSYSGVMTVGKNE-GGVVLMANLCPTDTPSKIPPllsSTP---- 140
gi 497453613 306 QTQ----------SVL-TA---TP---KV---KEL-RSYAGTVLLAQKPvGSTTVVGIICKTNRASTFPP---VLP---- 357
gi 501111264 186 ENK-----------AIVAA---IA---KQ---NGI-FSYTGAVYAQDAS----IPVSAICKSNEPTQTPP---GTP---- 233
gi 493669875  95 NEN----------LVLIDA---IP---TN---SRL-PNFAGAVFIIPGD-NLIQTVAGMCKSQDKLSAPI---QLS---- 146
gi 504955248 110 DAA----------SVTQQA---AS---TDapkNGT-RSYAGGVGFSSTS-G--VYANVVCQSDQITNTAP---SVT---- 162
gi 501598405 116 DSNtlnhsspsvqSVITIA---QPlsaYS---NNL-RIYIGATFFDEKS-N--TIQTAICKMNQVNTFPQ---TVP---- 178
gi 503089202 105 TYS----------GQRASA---SPv--YQ---NDI-LNYASAISQKNDG----TFTNIICESTSTTADDA---ATS---- 154
gi 501592154 102 GTS----------TGTVVAngtNN---NK---NGT-RDYAGGTQYNTAT-R--AFDTVVCRGDVGSTAAT---STPggag 158
                        170
                 ....*....|..
gi 123056650 161 -TAP-TAtATKC 170
gi 503088239 175 -ILN-SDkTIQC 184
gi 504042247 141 -VPG-QG--LKC 148
gi 497453613 358 -QPA-AE-PVQC 366
gi 501111264 234 -KLT-GS-TIVC 242
gi 493669875 147 -RGN-SP-VVEC 155
gi 504955248 163 -AAA-TP-Vcps 171
gi 501598405 179 -TLEkNQ-TLKC 188
gi 503089202 155 -Q-S-NN-EVFC 162
gi 501592154 159 eVSA-AT-AMTC 168
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