4DGW


Conserved Protein Domain Family
PRP9_N

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pfam16958: PRP9_N 
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Pre-mRNA-splicing factor PRP9 N-terminus
This is the N-terminal domain of pre-mRNA-splicing factor PRP9.
Statistics
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PSSM-Id: 319031
View PSSM: pfam16958
Aligned: 18 rows
Threshold Bit Score: 120.939
Threshold Setting Gi: 149237719
Created: 30-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
4DGW_A        17 LETRRSLLEEXEIIENAIAERIQRNPELYYHYIQESSKVfp-dT----K---LPr--sS---LIAENKIYKFKKVKR--- 80
gi 74604863    9 FEERRKILEELEVIEDAISSRLRRNPEIFYRFNEALHNL----GveawA---VPk---L---DVSANRIYRSKKSKR--- 72
gi 410730259   6 LEKRRSLLEDLEIIENAISTRFQRNPELYYSNLKKVSELfp-sKqv-eE---LPt--hS---IMTNNKIYKTKKLKR--- 72
gi 363751246   4 LEEKRAILEELELIEDAISDRIARNPEVFYSYIHELSIVns-dE----K---VLs--nIpnvDITANRVYMIKKSKR--- 70
gi 403217985   3 LDERVSLIRQLEILEDAIAARFQRNPALYYNSVPMLKKLtm-qA----EpkvCPp--qD---HVTKNKVYRVEKSAR--- 69
gi 366991887   5 LEKKRNLLEDLEVIEDAIAKRFQRNPELYYDNITKLSILtnlsI----D---TPa--eS---NKSNNKIYKRKKLKR--- 69
gi 410077307   4 LEEKRDLCEDLEVIEDAIAKRLQRNPELYYNYLEKLSSFekhsL----E---VPs--sI---DIKNNRVYKSKKAKR--- 68
gi 149237719   5 IEVQRALLEESNALEEGISRRFQRNPKLLPKNL-------------------IPkhgdL---LIDSNQSQKRKTKKRnnr 62
gi 401626376   4 LETKRSLLEDMEIIENAIAERIQRNPELYYHYIQKASKVf--sDv------eLPr--sS---LISENKVYKLKKVRR--- 67
gi 255712655   4 YEDARATLEELELIENAVTSRLRRNPEIFYRNIDEVDLVe--hSgrfdH---IPs---S---QKSANKVYTVKKSRR--- 69
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
4DGW_A        81 --KRKQIILQQHEINIFLRDYQEKQQTFNKIN-RP---EETQEDD-------K---DLPNFERKLQQLEKEL--K---Ne 139
gi 74604863   73 --SRKQIKAQEYEIALFLGRYRRLLKSLQKHKlSEehlEYFRDTN-------A---SFEQFETVTTEVLEGQ--V---N- 134
gi 410730259  73 --NRKQIALQQHEISLFIKDFFSKQKELETLT-REanfKAKKNKE-------EillPVEEFKDILSEINEADgnE---Ng 139
gi 363751246  71 --SRKQILLQQHEISKFLSYYLKNVKKLNGYK-NDn-vDEFKDHN-------Q---NFELFRDQIQRIKEKY--AeesNs 134
gi 403217985  70 --KVKQVATQQHEIKLFLQDRTDILNKLSRAQ-ESgpgESQY----------K---NLDEFKTAINGLTESN--I---Pk 128
gi 366991887  70 --SRKQFVLQQQEINIFLKDFEERRRVLL-----DlgkETVKDDN-------I---TLETFKTMIQDINAKK--S---Ss 127
gi 410077307  69 --SKKQIVAQQHEIRLFIEDYTNKQKGLNMLM-KRkdtTQIS----------S---DIGDFITSITENKSHV--K---Ss 127
gi 149237719  63 nySKRLVLLQQQELRLFLDRYKDILKSTSRIN--SggkQNLGQVElglltekD---SFDKFDALLAKVHKPQ--A---Vd 132
gi 401626376  68 --TRKQVILQQHEIDLLLRDYREKQELFNQSS-EL---ERGQEDD-------E---DLQSFEKKLHELEEEL--K---Sd 126
gi 255712655  70 --SRKQILAQEHEIKSFLSQYLKDCQSLGRV---EfdmSEYRVDN-------G---SVNKLLEHIERIKEi--------- 125
                        170       180
                 ....*....|....*....|....
4DGW_A       140 denfeldiNSK----KDKYALFSS 159
gi 74604863  135 --------SRSlvevKSDYEMFSG 150
gi 410730259 140 nrr-eleiNDK----INKYSMFSN 158
gi 363751246 135 eaf-daslEAR----KYQYTMFSN 153
gi 403217985 129 rs----glQSE----KDQYAMFSS 144
gi 366991887 128 ev---lpiNQK----ITRYAMFSA 144
gi 410077307 128 -------lKDK----IDYYSMFSA 140
gi 149237719 133 eey--gqdNIMalnpREAYSSFYT 154
gi 401626376 127 qdnfqldiNLK----RSKYALFSS 146
gi 255712655 126 --------HPKddefGDQYAMFSS 141
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