Conserved Protein Domain Family
zf-RRPl_C4

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pfam17026: zf-RRPl_C4 
Putative ribonucleoprotein zinc-finger pf C4 type
This is a family of largely microsporidia-specific proteins. One member is annotated as being a ribonucleoprotein. The family carries two pairs of CxxC residues suggesting that there is DNA-binding.
Statistics
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PSSM-Id: 319089
View PSSM: pfam17026
Aligned: 10 rows
Threshold Bit Score: 81.7368
Threshold Setting Gi: 523777502
Created: 31-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 74621769     1 MSRCEYCKSRNMLPLNGKYYCEECEIYYIYKDKK-QEYSNLPIE--------E-------IGQMTVGNHLCRKCKLKYSG 64
gi 484854946    1 MTICSYCRKSKLIKSDEYIYCPTCESYFTQTNVK-QKHAYVKIE--------D-------TDQITLYGNLCDYCEKKYNT 64
gi 484853248    1 MTICSYCRKSKLIKSDEYIYCPTCESYFTQTNVK-QKHAYVKIE--------D-------TDQITLYGNLCDYCEKKYNT 64
gi 440492120    2 SLTCTFCTRSNLSTYNDLWYCPTCTVYLKQKNGR-LFYHYIPSKi-------D-------GTIRSLNDILCTKCKTMNTT 66
gi 667639071    1 MKQCQFCNSHKTKVLNDTLFCENCEIYFTLKNGI-QLIKSLPIA--------E-------TKQRTL--NLCVSCSRRAMK 62
gi 169806656    4 LKICRTCLSNEIVILSHSIYCKVCNVYYHVESEN-QYVSSIPVK--------E-------FNCLSI--TLCIQCKSSINE 65
gi 817547734   14 TYKCQYCGTNVIKN-----YCSVCRSHFTIVNNNeQKYLSVEMD--------D-------LEFLSISDKLCPLCTRYYKN 73
gi 906371120    1 MKKCPYCFSKKLENLNETVYCDACQSYFR----R-TPTELVPIFienkevyrK-------YQKISERRILCTVCQERNEN 68
gi 523777502    4 PVECKFCCNKNLIFLYNKIFCSKCNIYYHIENND---WIPTPIH--------Q--------------SILSRLCNKCKNK 58
gi 1027186823   1 MKKCPYCFSKKLENLNETVYCDACQSYFR----R-TPTELVPIFi-------EnkeiyrkYQKICERRILCTVCQERNEN 68
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 74621769    65 KKS-I-ACTTFREYFKKLP--------------MCKRCKKSNERCIKNAFFKNFILYKTY 108
gi 484854946   65 EKY-I-TCQTFNDYLYGLN--------------FCTKCRIRNLKFLKNSYNKSFLLYKAK 108
gi 484853248   65 EKY-I-TCQTFNDYLYGLN--------------FCTKCRIRNLKFLKNSYNKSFLLYKAK 108
gi 440492120   67 ----V-KCTNFDCFYRKVQ--------------YCDTCKARGYMVLRNNFYKNLPRCHRI 107
gi 667639071   63 NSS-I-KCRTFREYLKRLP--------------YCSSCKSLNVVFLKNLFFKNFLLYKKI 106
gi 169806656   66 NRI-I-SCVNYIDFLHKLH--------------LCSNCKKTNENFLLNLYYRNFITYKKI 109
gi 817547734   74 SKY-IiRSTSFSDYFAKLK--------------FCKKCKNDSKKFIRNMFYKNFTLNRRL 118
gi 906371120   69 ENE---KFRAEDEQRLKLNkpikndtrtlvnsgLCRECVERVNSKLESDKNKYYSAYKSF 125
gi 523777502   59 KGK-I-ICSDIEDYIKKSL--------------FCKDCKQRVIQSIKYNFIRYNDIYKKN 102
gi 1027186823  69 ENEkF-RAE--DEQRLKLNkpikndtrtlinsgLCRECVERVNSKLESDKNKYYSAYKAF 125
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