Conserved Protein Domain Family
sCache_3_2

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pfam17203: sCache_3_2 
Single cache domain 3
Statistics
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PSSM-Id: 319221
View PSSM: pfam17203
Aligned: 18 rows
Threshold Bit Score: 85.1284
Threshold Setting Gi: 506231089
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123387587   37 TLRDTQARAQADRVTDIAQVVATRRDVARALQQrgdataFAPDSDLQGDI----DDLRRRLDVD--------------FI 98
13_pfamImport   1 QATNNFEKIEGRRSLSAAESLAANPLLRVLLPEa----ePEMGSALPAMG----ESVRSTSGLQ--------------FV 58
3_pfamImport    1 -FRRDYVNALFLRSQSLGTSMKGSIEK----------------------VlnlgLDIRDITGISekcrelvvgnpdiaYC 57
gi 506230782   40 YFKKRISQNQEENNLSLARNMARESVDPLLIHD---------YLQLDVLV----QSTKEALLCK--------------YA 92
gi 133914486   27 QSDAAFRATEGRRMLSVAEDLAATEGVRVSLPD------PFRHDVLPILA----ESARSLSGAD--------------HV 82
gi 503279019   32 RLKREMTREHESKALALADSVAESDIVTILSQD------A---GGVQARI----DRYQRIAGVS--------------YV 84
gi 501446593   40 RQEAVALQQHVLQARALTQSVSASSAVWVASRD---------YSGLQEII----AALEHYPNLA--------------HA 92
gi 501444795   33 EMYRQAQVSQESR-IKTFWELLRARGNEFSVVDnkllagSYALNNNEELP----DKLKELCGGTa-------------TI 94
gi 500033354   37 YAFDAIMKDQEARLARIIGSVVGEAVGRVSFSG---------KHHTRLLVk---DLIAKNPQFS--------------HI 90
gi 506231089   31 iLVSGLTSELKMRGVAIARSISERGGGYILDKE---------YPQLLSLIfdeaQLRERHHLID--------------YI 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 123387587   99 VVMNHRGMRLTH---PDRT-------R-IGEHF---QGGDEGPALEGEHYASRAQGTLGLSIRGFAPVVDD-AGEVIGAV 163
13_pfamImport  59 TIADPRGTVVTS---SYPD-------E-VGTSI----LHPESAVTEGRGWTGEIWRNGNHVLIAQVPVLDD-EGKMVGIV 122
3_pfamImport   58 VITDLDGNILFL---SNPAfdnfqfnV-VIRSFttnPRQQINLVGQNPAYYDTVTL-------VKAP-----DGRSTAQI 121
gi 506230782   93 YILDHHGRVVAH---SDKS-------R-LGQKYs--PPSTEEQYIRDRKVAGVM------YQDYFLPIRVR--GELLGYA 151
gi 133914486   83 IIADGRGIVLTS---PDPG-------Q-RGQRL----PTGASTALSGRAWVGEIDTDGVDSLVAQVPVISA-DARIIGVV 146
gi 503279019   85 LVADERGEIMAHtfvPDVP-------K-VVRALv----AGTAQLPGDEVVLRDIVYGDNRYLHVSRPILAG----LAGSV 148
gi 501446593   93 IVLDSRGQVLAH---SDRK-------R-IGLYLt--GLPDQPLLQVLQKTIRMV--------DVASPIL-L-GGKPIGWV 149
gi 501444795   95 FMGDER--ISTNivkPDGS-------RaVGTRLs--GPAYAAVLQKGESYRGVADILGTPYFTAYDPIKDR-NGAVIGIV 162
gi 500033354   91 GVINLEDQIIAH---SNDQl------N-DRPMLwpqGMSLQKALTEPNQVYHFSLFGRPTVRELFLPYHSGfNNRLAGII 160
gi 506231089   88 YVLDREHTVLAH--------------T-FTRPFpesLHMANPIPPGARESMQLVPVAEGEAFDIGVPIKE--GIYRIGTV 150
                         170
                  ....*....|....*...
gi 123387587  164 SVGVTLDTLGARLADNRQ 181
13_pfamImport 123 SAGQSYPSTGEMIQEIAP 140
3_pfamImport  122 HIGFKETIISEKVRGMI- 138
gi 506230782  152 VVGIDRNKETAVIQQSLH 169
gi 133914486  147 SAGRETPDVLQGLREAPQ 164
gi 503279019  149 HIGMDSEIIARHIREAVl 166
gi 501446593  150 RIGLNGKGLEADIAEIHR 167
gi 501444795  163 YVGVKTSEFYAAYHHLQi 180
gi 500033354  161 HIGIRQDATTRALKSgfl 178
gi 506231089  151 HVGLNKSHIDSLVYKLRV 168
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