Conserved Protein Domain Family
TIGR00295

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TIGR00295: TIGR00295 
TIGR00295 family protein
This set of orthologs is narrowly defined, comprising proteins found in three Archaea but not in Pyrococcus horikoshii. The closest homologs are other archaeal proteins that appear to be represent distinct orthologous clusters. [Hypothetical proteins, Conserved]
Statistics
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PSSM-Id: 129396
View PSSM: TIGR00295
Aligned: 3 rows
Threshold Bit Score: 239.755
Threshold Setting Gi: 11498823
Created: 7-Oct-2014
Updated: 23-Jan-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2833583     3 FEKALSILKnlCSENVVEHCLAVSEYAYELALAIKnkgyeVDVELVRLGGLLHDIGRSRTHG-IEHGVVGAEILRELGFD 81
gi 499179735   2 SLRLLRVVG--CPEWVIDHSLAVRKKALELSRELP-----VDMKLVEEGAILHDIGRCRTSG-VEHAVEGARILEGFGYP 73
gi 499181179   7 VQRLWDKYK--LDESVRRHCLTVARVAMKIAENIRkkgheVDMDAVLKGALLHDIGRAITHDpFQHFIKSAEILRKEGVD 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2833583    82 EKLALIAERHIGAGITKEEAIELGLPPKDYLPITLEEKIVAHADNLIFGTKRVEIDDVIKKFEKRLGKN-------HPSI 154
gi 499179735  74 PEVVRIVERHVGAGIPPEEAKALGLPPGDYMPRTLEEKIVAHADNLINGSDEVDIDFVIKKWSDRLGAD-------HPSI 146
gi 499181179  85 EKIVRIAERHFSAGINAEEASKLGLIPKNYMPETLEEKIVSFADNLAMGVREGTFEEFMRRLEEIDRKNpemrwltERTR 164
                        170
                 ....*....|....
gi 2833583   155 KRIILLNDEINNLL 168
gi 499179735 147 ESLKRLHEELLGHL 160
gi 499181179 165 ERARKMKEELERLS 178
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