Conserved Protein Domain Family
cyt_b559_alpha

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TIGR01332: cyt_b559_alpha 
cytochrome b559, alpha subunit
This model describes the alpha subunit of cytochrome b559, about 83 residues in length. The N-terminal half is homologous to the ~ 40-residue beta subunit. Cytochrome b559 is associated with photosystem II. Sequences scoring between trusted and noise cutoffs are fragments. [Energy metabolism, Photosynthesis]
Statistics
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PSSM-Id: 130399
View PSSM: TIGR01332
Aligned: 3 rows
Threshold Bit Score: 162.372
Threshold Setting Gi: 16329684
Created: 8-Oct-2014
Updated: 23-Jan-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 3024454    2 SGATGERPFSDILTSIRYWVIHSITIPSLFIAGWLFVSTGLAYDVFGSPRPNEYFTEDRQETPLITDRFNALEQVKKFSE 81
gi 6093812    3 GGSTGERPFSDIITSIRYWIIHSITIPALFVAGWLFVSTGLAYDIFGTPRPNEYFTQERQQVPLVNDRFSAKQELEDLTK 82
gi 499174134  2 SGTTGERPFSDIVTSIRYWVIHSITIPMLFIAGWLFVSTGLAYDAFGTPRPDEYFTQTRQELPILQERYDINQEIQEFNQ 81
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