Conserved Protein Domain Family
CPW_WPC

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TIGR01492: CPW_WPC 
Plasmodium falciparum CPW-WPC domain
This model represents a domain of about 61 residues in length with six well-conserved cysteine residues and six well-conserved aromatic sites. The domain can be found in tandem repeats, and is known so far only in Plasmodium falciparum. It is named for motifs of CPxxW and (less well conserved) WPC.
Statistics
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PSSM-Id: 130556
View PSSM: TIGR01492
Aligned: 13 rows
Threshold Bit Score: 61.6479
Threshold Setting Gi: 124513380
Created: 8-Oct-2014
Updated: 23-Jan-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 4493968    300 NCVQDfEnSICPLEWTMKNEEY-----CISPESYVGN--CLNQINFI-NMTNKEKAIYSNLCDVRWPCKK 361
gi 4493968    362 KCEHDyS-VLCPDEWIEGNDGY-----CFPTRNYKGN--CKNKIYFK-HLDKIMKETYEQKCQFSYPCIN 422
gi 4493968    238 NCVRNyR-EKCPLNWKINKDNKl---yCMAPESYKGP--CERKLITN--LDISEKIKIEKKCYLFWQCEN 299
gi 4493968    484 KCKRNyS-YSCPIGWKETLSf------CLAPNSYKFN--CN-KLIKN-DMNEKEKIEISKKCHIFWPCEN 542
gi 574966055  219 RCVRNyT-SFCPEKWYQVNGTLr---sCKPLDDYTGP--CIFEMNFS-GYNKRMLEDWSLKCKAWWKCDH 281
gi 574973138  309 MCEINyS-KLCPEDWIDMGDGIs----CLSPLHYKGP--CEKKVIFK-NASAKSKYNFSINCNVSWPCSK 370
gi 124806503  165 ICIEDfS-KKCPENWIHNIENNt----CEAPKNYAGK--CIRQKNFD-HYSQSEKKVWAQICDINWSCYD 226
gi 124806503  959 KCEENfY-QTCPYNWIFKDNK------CIAPYYYVPPkgCSHSFDIL-SFRNFDKFLYSNKCFAPWPCKD 1020
gi 574966096   44 KCTFGyDiYACPRGWLNLMNSGa----CKAPDDYIAPnnCPRITHFD-YMDINEKEKFSKICNVKWLCVE 108
gi 574992817   58 ECKMDdN-DPCPKDWILKSDEFgtpqnCLPPDYYNGS--CDEHTKFI-GLNSTLKESLAYECDIKWPCEI 123
gi 574970798   83 KCLKDyT-LPCPNYWKRRTDKYgk-nvCIANEEYNGF--CEQVQIFD-EFSEHEKMSYESSCNVEWGCKG 147
gi 574970798  219 cisEEyI-SDCPKNWKQVN-KYd----CIPDKNYKGP--CRNIKNFK-YFTLSMKKDFEEKCKTKFECNN 279
gi 574970798  280 ICEKNyE-QECPLNWKV--EKGy----CLAPDTFDL---CKRKKISIeNMTRKEKENIEKECFVSWPCIN 339
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