Conserved Protein Domain Family
A_thal_3678

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TIGR01568: A_thal_3678 
uncharacterized plant-specific domain TIGR01568
This model describes an uncharacterized domain of about 70 residues found exclusively in plants, generally toward the C-terminus of proteins of 200 to 350 amino acids in length. At least 14 such proteins are found in Arabidopsis thaliana. Other regions of these proteins tend to consist largely of low-complexity sequence.
Statistics
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PSSM-Id: 130631
View PSSM: TIGR01568
Aligned: 8 rows
Threshold Bit Score: 101.29
Threshold Setting Gi: 13877677
Created: 8-Oct-2014
Updated: 23-Jan-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40        50        60        70
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 13877677 165 VTQHVDSPDPLTDFRRSMQEMIDAAidagELSRDpndgYDFLDELLLTYLSLNPADTHKFVIRAFSDILVSLLS 238
gi 7268232  103 IMKHIESPDPYRDFGRSMREMVEARdltrDVVAD----REYLHELLFCYLYLNPKHTHRFIVSAFADTLLWLLS 172
gi 14994265 110 MLFSLESDDPYSDFKRSMEEMVEAH----ALHHD----WKSLEKLLLQFLKVNAKTSHRYIFAAFVDLLMNLAL 175
gi 9758457  148 VAVAMESEDPYGDFRRSMEEMVTSHg---ELAKD----WESLESMLAWYLRMNGRKSHGVIVSAFVDLLSGLSD 214
gi 5902362  193 IAVLRYTDEPQEDFRQSMVEMMESKlgmrESEVD----WDLMEELLFCYLDLNDKKSHKFILSAFVDLIIALRE 262
gi 4218008  228 VAVVKKSEDPYEDFKGSMMEMIVEK----KMFEV-----AELEQLLSCFLSLNAKRHHRAIVRAFSEIWVALFS 292
gi 20196884 254 FAVMKRSVDPKKDFRESMIEMIEEN----NIRAS-----KDLEDLLACYLTLNPKEYHDLIIHVFEQIWLQLTK 318
gi 9757804   98 VAMAKESINPFEDYKKSMNQMIEER----YIETE-----SELKELLRCFLDINPSPQHNLIVRAFVDVCSHLQP 162
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