Conserved Protein Domain Family
tspaseT_teng_N

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TIGR01765: tspaseT_teng_N 
transposase, putative, N-terminal domain
This model represents the N-terminal region of a family of putative transposases found in the largest copy number in Thermoanaerobacter tengcongensis. The three homologs in Bacillus anthracis are each split into two ORFs and this model represents the upstream ORF. [Mobile and extrachromosomal element functions, Transposon functions]
Statistics
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PSSM-Id: 130826
View PSSM: TIGR01765
Aligned: 7 rows
Threshold Bit Score: 74.7383
Threshold Setting Gi: 397652167
Created: 8-Oct-2014
Updated: 23-Jan-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 22406255    4 TLQIKLLPDDNQ-K-ALLLDTFRQFNEACNFVSKIAWDNKIYN--KISLQKLVYYD--IRNKLGLSAQLTIRVIAKV 74
gi 490184114   6 TCRFKLELSKDQ-K-QQFLDIATAYTNAVNYVLEQNLKDKSTN--VKKLHRLYYKT--IREDFDLPAQMAINVNRDV 76
gi 499343178   6 TIKLKLSVSEED-K-EYLKKTITLFNTVFNEVAKYGFEHKTHS--KVSIHHATYKD--IREKYPELPSSLVQGARDI 76
gi 499334496   3 VIQAKLIFLNQEdK-QIVLDLMRRWSSCMRFAYKRLLEGYDRKtlKRDLQGMFDLNsrYVDDAIMKARSTLESARQL 78
gi 499284891  19 TINGKVNFEDKE-R---VVRIAKAYSQVVKSTIRPLFDGKSIDelTKEFYNLLP-N--YLETALKQAKTIIDGLLER 88
gi 504648365   5 TIKATLEAEKKE-DyLKLALLTEKFKRAVELSIRLQLKGVKKSegVKEVSRLILNNwwYSDSAWDYAKMLRKGAERS 80
gi 446781782   4 TRACKINSITKE-QtEALITLIRTFESAKRYSFNRLIEGENEKelIKKLQLKYLLNkrFCEDAVLQAQTILSTQKEL 79
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