Conserved Protein Domain Family
phasin

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TIGR01841: phasin 
phasin family protein
This model describes a family of small proteins found associated with inclusions in bacterial cells. Most associate with polyhydroxyalkanoate (PHA) inclusions, the most common of which consist of polyhydroxybutyrate (PHB). These are designated granule-associate proteins or phasins; the member from Rhodospirillum rubrum is an activator of polyhydroxybutyrate (PHB) degradation. However, the member from Magnetospirillum sp. AMB-1 is called a magnetic particle membrane-specific GTPase.
Statistics
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PSSM-Id: 130900
View PSSM: TIGR01841
Aligned: 14 rows
Threshold Bit Score: 64.3
Threshold Setting Gi: 71279966
Created: 8-Oct-2014
Updated: 23-Jan-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 14717374   27 LFEGAEELAKLQFKTIRAATDDNFENLRKIISVRDPQAFLELQASFFKPNeqAERLVEFSRQTYDLISRFQAEVTR---- 102
gi 23016576   49 AFEGLQNVVKRQVEILRQTIDEVAQVSKDFAEPGSPQDKAAKQAEFAKDA--FERALGNARELAEMIAKANSEAFD---- 122
gi 27465073   48 AFEGVQAIFKRQAEILRQSVEESAQAAQDIAKAETPQDKIAKQTEVAKES--FEKSVANLRELVELLAKSNTEVFN---- 121
gi 14021974   67 GAAGATSLLSRQREMLQDTLREIADMAQSYRAPGNPQELMAKQTEFARKS--FEAALKNTGEVAELARKSGTESIE---- 140
gi 22977564  133 AYEGMQALVQKQTEILSKSMQEIQATAQKMATSGNPAEAMTRQGELVQQG--LQTAFNNMRELAEMAQKSQAEALA---- 206
gi 23103423   27 VIEGSERLVRLQFQALHTASDLFFANWRRLLSAPDPRAAVELS-----PAaqAVRMLEYGRQAQEVAAASQRVLLD---- 97
gi 22986519   28 SMEAFERLTALNLQAIRFGIAETQEVVARACAAGNLPEILCLP-TLLAPAg-AAQALSYSRQFFEILSDLQPDLAVppvg 105
gi 23016167   72 FAKGFQDISKAFIGLTKSGIEEQVAASKTLLSAKTLKEYIDLQTDIAKAG--VDKLVVESTRLTEQSVKLVEDALA---- 145
gi 518548409  25 AVDGINRVIGLNLQALKAGLGETEQCLHEVAGAQDAGQWFTAHVRYLQPA--GERVSGYTRNLVEIGVQTQNGIAQ---- 98
gi 499309217  25 ALNSVEKLSELQFQTVRASLEDSTEQGKRVFDARSLHELTALQSEVSQP---TEKLVAYGRHLYQIAAGTHAEWRK---- 97
                         90
                 ....*....|....
gi 14717374  103 LTERQIEIGTQQAQ 116
gi 23016576  123 LLNKRFTQSLDEAR 136
gi 27465073  122 LLNSRVSEVLDEAK 135
gi 14021974  141 ILRARIKEAMEEIR 154
gi 22977564  207 VITKRAEQSIAEAK 220
gi 23103423   98 LARRQMDIGARQMH 111
gi 22986519  106 AVRQRHAAGSVATQ 119
gi 23016167  146 PISQRVNATVDKLV 159
gi 518548409  99 ALQRHGDEVRRHWG 112
gi 499309217  98 VAQTRANEQCRIAl 111
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