Conserved Protein Domain Family
FYDLN_acid

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TIGR02300: FYDLN_acid 
TIGR02300 family protein
Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.
Statistics
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PSSM-Id: 131353
View PSSM: TIGR02300
Aligned: 3 rows
Threshold Bit Score: 91.974
Threshold Setting Gi: 15073181
Created: 8-Oct-2014
Updated: 23-Jan-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 13425334  33 LANPDLGAKQICPNCQSKFYDLNRRPAVCPKCGEQFDPEEALKSRRVraravtpdydaDDEKEAVaPKEVDgyedevddt 112
gi 39652765   1 MAKSDLGTKRICPTTGKKFYDLNKNPVISPYTGEVVPIAPVTAPRTR-----------ADQRSPV-VDTEA--------- 59
gi 15073181   1 MAKPELGTKRIDPETGRKFYDLNRDPIVSPYTGKSYPLSFFEETSVAk---------vLEKEEEEdVKEVD--------- 62
                        90       100       110       120       130       140       150
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 13425334 113 PEIDEAAEADVVETDDEDVDPG---APTPAGGDDLgvdfAEDEDLADEDGDdVPFLE-DEDDDDILDEEIEG-LPGE 184
gi 39652765  60 PEAMEAEELVSLEEADAEENTGkvkAVVPESEDDI----EIDEAIDDDDDD-STFIA-DEEEEDEDVTDIIGdVSGD 130
gi 15073181  63 TENTE-VELVSLEEADDEASGG---DDLPDLGDDD-------VEIEGDDDD--TFLQtDDEDDDDDMSDIIG-VSDE 125
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