1XL3


Conserved Protein Domain Family
type_III_tyeA

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TIGR02511: type_III_tyeA 
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type III secretion effector delivery regulator, TyeA family
Members of this family include both small proteins, about 90 amino acids, in which this model covers the whole, and longer proteins of about 360 residues which match in the C-terminal region. The longer proteins (HrpJ) have N-terminal regions that match pfam07201. Members of this family belong to bacterial type III secretion systems, and include TyeA from the well-studied Yersinia systems. TyeA appears involved in calcium-responsive regulation of the delivery of type III effectors.
Statistics
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PSSM-Id: 131563
View PSSM: TIGR02511
Aligned: 10 rows
Threshold Bit Score: 55.797
Threshold Setting Gi: 52422296
Created: 8-Oct-2014
Updated: 23-Jan-2015
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1XL3_C        3 YDLSEFMG------DIVALVDXRWAG-----------IHDIEHLANAFSLPTPEIXVRFYQDLXR--------------M 51
gi 38674627   3 YGPSDLMG------DLIALVEKRWAT-----------VRDVEQVGSALELADTRQQVQLYQELKR--------------L 51
gi 140989     3 YDLSEFMG------DIVALVDKRWAG-----------IHDIEHLANAFSLPTPEIKVRFYQDLKR--------------M 51
gi 41834178   3 YQVTDLMS------DVIALVEQRWVG-----------SAEIWNLVNAMELASMERKISFFRELHK--------------L 51
gi 46447689 284 LTAQGLLE------QVVALRSENFLG-----------ALHIDRIAAQAKAPDIEHEVLFLQELLR--------------M 332
gi 33568200 282 ADAQGLMR------DLVGISEDKWIA-----------PARFEKLAERHGANALSERIAFLGGVRQ--------------I 330
gi 11276508 261 KGCEHLLGrmrnknPDLTVDPPAFLKhlltltangmnVNQTLQLTQHIGGKQLKHQLAFLNGLRP--------------M 326
gi 34103900 288 LDGNRIIE------ELLEIIQQSWVY-----------PDWLSSRADAL-MPEEHSRHGYARRMGE--------------L 335
gi 3941397   86 KDKDVILN------EVLSIIEHVWLT-----------EDWLLESPSRVSIVEDKH-VYYFHLLKD--------------F 133
gi 52422296 245 AEFGPLLGtlh-raRMLASADEQFVG-----------RLLDDALARDCGLTEARALATMLGGLQRpfsvadvllgtlgdL 312
                        90       100       110       120
                ....*....|....*....|....*....|....*....|....*....
1XL3_C       52 FR-------------------LFPLGVFSDEEQRQNLLQMCQNAIDMAI 81
gi 38674627  52 IR-------------------LLPIELFSEEEQRQNLLQCCQGALDNAI 81
gi 140989    52 FR-------------------LFPLGVFSDEEQRQNLLQMCQNAIDMAI 81
gi 41834178  52 IR-------------------HIPIDVFNDEEQRQNLIQAVQKALDEAI 81
gi 46447689 333 TR-------------------NVPAQLFDGTAGRMKLLDAVQDAVDRAI 362
gi 33568200 331 LK-------------------DLPTQIYADMDVRATVLAAAQDALDNAI 360
gi 11276508 327 LL-------------------QLPILLWRDMKSRQTALSNLLILMAELT 356
gi 34103900 336 VK-------------------LLPDDCFEDIDQRETILAAFLEYQEQLA 365
gi 3941397  134 FA-------------------SLPDACFIDREQRDNTLLMIGKVIDYKE 163
gi 52422296 313 LEplaparrsqllqlalrafaGVPIALYGDADARRAALGALEELIGATY 361
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