Conserved Protein Domain Family
HrpB1_HrpK

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TIGR02561: HrpB1_HrpK 
type III secretion protein HrpB1/HrpK
This gene is found within type III secretion operons in a limited range of species including Xanthomonas, Ralstonia and Burkholderia.
Statistics
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PSSM-Id: 131612
View PSSM: TIGR02561
Aligned: 4 rows
Threshold Bit Score: 189.673
Threshold Setting Gi: 52213059
Created: 8-Oct-2014
Updated: 23-Jan-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52213059    7 TYLRCSHAALNGLIDATNLALGgaldgpAADPYDIGLLIDALRVLAPQLPAADMFDGMLQIALGNWDDAARAFAEISNGT 86
gi 52212840    7 DYMQCRPEIVGGLIETVSTALLrtfpkvTADPYDIELILDALRVMRPNVVEIQMLDGVLYMACGRWDDAIRILSEVCATA 86
gi 1097285     2 EPIQCSNRLLGGLLEVLMYATR------SGQFENAQAMLVALRGLRPNFKELDLVEGWLLVGRHQYAEAARILRELLSSD 75
gi 499361988   2 EKIQCPGSVVSGLIELITVGLT------HDKIQDAAAVLAAVRVLRPELKALDTFDAWISIKRGNYVEGARLLRELEGDA 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 52213059   87 SNA---VYGKALLALALQVKRDPEWRLAADEVLAAGGPAQAIALVRALErqhdvllakehaqrtGVWELPASVAAASGDA 163
gi 52212840   87 PHF---GYGKALLAFCLSTKGDDAWKQHAAEALESSPNDDTLVLVKALQaredmvkavqanrngGPFVPPQSVCELNAEL 163
gi 1097285    76 GAPsvmPFASAMMALCLNALNDAEWHVHANEVLARDADPDSVTLVRTLL---------------GAQQANSGSAEAAAAV 140
gi 499361988  76 GSK---PLCRALYACCLFAMGDQSWHGVADGLIEEDADADAVALVKALS---------------GRRTPTAAPAEVPVES 137
                        170       180       190
                 ....*....|....*....|....*....|
gi 52213059  164 AGTAGEAPganpsggfdpqaaFAHQQYLRL 193
gi 52212840  164 ERSAPQAEqpiae----rvevAQYGATLRA 189
gi 1097285   141 AETIDMSA-------------FHTSHYFTR 157
gi 499361988 138 SAPMEVP----------------NSQYLRA 151
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