Conserved Protein Domain Family
stabl_TIGR02574

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TIGR02574: stabl_TIGR02574 
putative addiction module component, TIGR02574 family
Members of this family are bacterial proteins, typically are about 75 amino acids long, always found as part of a pair (at least) of two small genes. The other in the pair always belongs to a subfamily of the larger family pfam05016 (although not necessarily scoring above the designated cutoff), which contains plasmid stabilization proteins. It is likely that this protein and its pfam05016 member partner comprise some form of addiction module, although these gene pairs usually are found on the bacterial main chromosome. [Mobile and extrachromosomal element functions, Other]
Statistics
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PSSM-Id: 131625
View PSSM: TIGR02574
Aligned: 9 rows
Threshold Bit Score: 54.7131
Threshold Setting Gi: 13881886
Created: 8-Oct-2014
Updated: 23-Jan-2015
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40        50        60
                ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 21647468   1 MKLSVFERIQLVEDIWNSIAaEASDTIelLSQTQKDELHRRVAEHRADPSTA-VPREQVKSRLFSG 65
gi 32397904  21 SALPPNDQLRIVQAIWDRLP-DGVGTD--LTESQRAELDRRWAEYKADPTTA-LSEEEFRERIRIA 82
gi 30138924  17 TELPIDERIQLVEDLWDSIAsDQKMLR--LTTEQKAELDRRLNAYEVDKNPGrSALEAIAEIRRNL 80
gi 399107620 10 LDLSISERIQLVEDIWDSIAsVPESVQ--LTDEQKIELDRRLDAYHADPGKG-SPWDIVRERIRNR 72
gi 14194403  11 KALSIDDRIRLVQAIWDSIEaEAEQLT--LTEPQKQELSRRMADHKANPDAV-ISWEAVKAQARAR 73
gi 35212256  10 TRLTPQERLALIEQLWDSLDeSAIPLP----DSQQAELSRRLVSLHDDRSQA-LTWEQLRSELARR 70
gi 21647517  13 LRLTPVERAEMIERLFQSFDnHRKAEI---DAAWAAEFESRLDAYKEGKIKA-SPVEEVMARINKR 74
gi 13881886  12 DALSRDEQIELVEHINGNLA-EGMHIS----EANQALIEARANDTDDAHWST---IDDFDKRIRAR 69
gi 497733697 20 LKLSAPEREVIARRLMDSVApPPGVYE--SEDALRAELLRRIEDIESGRVKP-ITPEEMFANVRKA 82
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