2RCF


Conserved Protein Domain Family
carboxysome_A

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TIGR02703: carboxysome_A 
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carboxysome peptide A
This model distinguishes one of two closely related paralogs encoded by nearby genes in the carboxysome operons of a number of cyanobacteria and chemoautotrophic bacteria. More distantly related proteins, also belonging to pfam03319, participate in other types of shell such as the ethanolamine degradation organelle. [Central intermediary metabolism, One-carbon metabolism]
Statistics
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PSSM-Id: 131750
View PSSM: TIGR02703
Aligned: 5 rows
Threshold Bit Score: 135.813
Threshold Setting Gi: 33639221
Created: 8-Oct-2014
Updated: 23-Jan-2015
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40        50        60        70        80
                ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
2RCF_A        1 MKIMQVEKTLVSTNRIADMGHKPLLVVWEKpGAPRQVAVDAIGCIPGDWVLCVGSSAAREAAGSKSYPSDLTIIGIIDQW 80
gi 4836664    1 MKICQVEKTLVSTNRIKEMGHRPLLVVKEK-GGARSIAVDAVGCVSGDWVICVGSSAAREAAGSKDFPSDLTIVGIIDHW 79
gi 46359635   1 MKIFKVDKTLVSTSRISMMEHKPLLVVREKdGGTPQVAVDPIGCKPGDWVLCVGSSAARDAVGIKGYPSDLTIVGIIDKW 80
gi 33639221   1 MLIVKVIKPLVSTNRIPDFEHKHLQVVQD--GSAKKVAVDAVGAKPGDWVICVSSSAAREAAGSKSYPSDLTIVGIIDHW 78
gi 3449370    1 MKIMQVEKTLVSTNRIADMGHKPLLVVWEKpGAPRQVAVDAIGCIPGDWVLCVGSSAAREAAGSKSYPSDLTIIGIIDQW 80

                .
2RCF_A       81 N 81
gi 4836664   80 S 80
gi 46359635  81 E 81
gi 33639221  79 E 79
gi 3449370   81 N 81
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