Conserved Protein Domain Family
spore_safA

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TIGR02899: spore_safA 
spore coat assembly protein SafA
SafA (YrbB) (SafA) of Bacillus subtilis is a protein found at the interface of the spore cortex and spore coat, and is dependent on SpoVID for its localization. This model is based on the N-terminal LysM (lysin motif) domain (see pfamAM model pfam01476) of SafA and, from several other spore-forming species, the protein with the most similar N-terminal region. However, this set of proteins differs greatly in C-terminal of the LysM domaim; blocks of 12-residue and 13-residue repeats are found in the Bacillus cereus group, tandem LysM domains in Thermoanaerobacter tengcongensis MB4, etc. in which one of which is found in most examples of endospore-forming bacteria. [Cellular processes, Sporulation and germination]
Statistics
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PSSM-Id: 131945
View PSSM: TIGR02899
Aligned: 6 rows
Threshold Bit Score: 75.6035
Threshold Setting Gi: 47505105
Created: 8-Oct-2014
Updated: 23-Jan-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                        10        20        30        40
                ....*....|....*....|....*....|....*....|....
gi 10173837   6 VQKGDTLWKLAKKYGVDFEQLKAANSQLANPDMIMPGMKIKIPT 49
gi 47505105   1 MQKGDTLWKIAKKYGVDFDTLKQTNTQLSNPDLIMPGMKIKVPS 44
gi 22777724   6 VQKGDTLWNLSKQYGVDFQELKEVNTQLSNPEKIMPGMKIKIPS 49
gi 28204389  29 VQKGDSLWKIAVKNQVGLDELISSNPQLKNPSLIYPGAKISIPS 72
gi 20516340  25 VQPGDSMWSIANKFGISLDCLIKANPQIRDPNLIYPGQQICIPF 68
gi 10174421  33 VVSGDTMWKIAARYQVGVSEIIQANPQVSNPNVIYPGQKLNIPA 76
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