Conserved Protein Domain Family
GT4_WavL-like

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cd03819: GT4_WavL-like 
Vibrio cholerae WavL and similar sequences
This family is most closely related to the GT4 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Statistics
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PSSM-Id: 340846
Aligned: 23 rows
Threshold Bit Score: 195.266
Created: 15-Dec-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative ADP-binding pocket [chemical binding site]
Evidence:
  • Comment:Some of the residues involved in ADP binding bind indirectly.
  • Comment:Based on similarity to sequences with known structure

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                        #                                                               
YP_074927      4 ILLAAMALd-----lGGAETHVISLARELhrRGHRVVVASAGGRMvplleergip-hivvpmasrNPLAMARAYRRLRRL 77  Symbiobacterium...
EDP63985      36 ILQVLPALv-----sGGVERGTIDVARAQieAGWRALVVSNGGPMvhelerigat-hitmpihskNPLIWRANFDRMVDL 109 alpha proteobac...
CAP55388      15 ILQVLPALd-----aGGIEQGTIEMADAItrAGGVALVACAGGRLlarlrhaggv-hmpidlrtkNPLRILLNARRLARL 88  Gluconacetobact...
AAY61398      15 ILQVVPALv-----sGGVERGTIEVAKYLkiLGHTPIIISAGGTLvkeldkedil-hiemnssskNPFVILNNAKLIAEI 88  Rickettsia feli...
AAR27963       3 ILMALSQLe-----vTGAEVYATTVGNELtrRGHQVFYVSDTLTKahagpgf------klrfnkrSILRRFWHVFYLVYL 71  Aeromonas hydro...
YP_001387892 268 ILMLIDALn-----iGGTEMYVLELAKSLekLGAHVVIGTSGGPLvevfkhy------glkvvkiPFTSDYISNKNIMKL 336 Clostridium bot...
NP_274709      7 ILNIVSAKi-----wGGGEQYVYDVSKALglRGCTMFTAVNKNNElmhrrfs------evssvftTRLHTLNGLFSLYAL 75  Neisseria menin...
YP_001635201   3 ILFITGEYpp---qpGGVGDYTQRLGQALvrNGHEALVVTVVKRKwqiwqits----dgdralpaPAGRAGWGIGSLGRL 75  Chloroflexus
AAL94596       3 ILMALSQLe-----iTGAEVYATTIADELieRGNKVYIVSDTLTTptkaeyi------klefnkrSLLKRIEHIKFLYNL 71  Fusobacterium n...
NP_925141      5 IWTIFYQFdpwgtsiGGIQTAIRACIRYAp-EVFDLRLVGTAGDDrhpvgqwrdgeldgrqlrflPLFVSGDDNVRRKIP 83  Gloeobacter vio...
Feature 1                                                                                        
YP_074927     78 Ia----------EHQIGLIHAHARI------PAWLCALAVRgkgiPLVTTYHGVYNAgf------------------pWK 123 Symbiobacterium...
EDP63985     110 Iw----------RERVDLVHARSRI------PAWIAFRAARrnrvPFVTTFHQRPAArtal--------------krlYN 159 alpha proteobac...
CAP55388      89 Ir----------AQGVHLVHARSRA------PGWSAALACRrtgvPLVTTWHGVYREsvpg--------------krrYN 138 Gluconacetobact...
AAY61398      89 Ik----------KYNVDIVHTRSRA------PAWSSYLATKwtnaKFLTTFHGVYNIpnsf--------------kkyYN 138 Rickettsia feli...
AAR27963      72 Ik----------KHHIQLVHAHSRA------SGWSSYVACKltgtPMITTVHGRQPVha------------------sRK 117 Aeromonas hydro...
YP_001387892 337 Ikltk---kiidEEKINLLHCHLFA------SMRLGNDIYRs--yKIPYIVTLHGLFypn----------------dvLF 389 Clostridium bot...
NP_274709     76 Trf-------irKNRISHLMIHTGK------IAALSILLKKltgvRLIFVKHNVVANktd----------------fyHR 126 Neisseria menin...
YP_001635201  76 Trlv-----hqlRPDWCHIQYQTGAyqmkigVNLLPLLLRRsr-lPTAITYHDLLPPylfpka---------gvvrewVT 140 Chloroflexus
AAL94596      72 Ik----------EKDIQIVHAHSRA------SSWSCQVACKlagiPLITTTHGRQPIhf------------------sRK 117 Fusobacterium n...
NP_925141     84 TtltytaallgkRIEGDFLHFHRLE------PALAARGWSG----EKTYFVHNDVRAqmltserkdallwqrfpsgyfAL 153 Gloeobacter vio...
Feature 1                                                                                   ###  
YP_074927    124 YLTTFGQRAIAVSEDVRRHle--gpLGAPPAIIRVIPNGFETGEFRPGldiapll------relgvdRTGPHVVHASRlt 195 Symbiobacterium...
EDP63985     160 SVMVRGDRVIAISHYVADRli--adYGLDPARLRVIPRGVDLSLFDPErvsaerlvr--lverwripDGVPVVVLPARvt 235 alpha proteobac...
CAP55388     139 AVMASGRRVIAISAFIAQRla--rdYGVGPDRLRLIPRGVDTARFDPDivrgpriqa--laeqwglpEDAAIIMLPGRit 214 Gluconacetobact...
AAY61398     139 SIMLKGEKVIAVSNFVKQHll--enYKIDEDKIVVIERGVNCDYFDPAnltpeklkk--crdkydapSNVPIILMPSRmt 214 Rickettsia feli...
AAR27963     118 AFHALGFRAVAVCEDIASQii--dnLGVDPAIVQVLRNGIETDKFQPVsa---------------pdNAKPVIAIIGRls 180 Aeromonas hydro...
YP_001387892 390 ESCINATKIIAVSKPIKKLies-klGSRIRGEIMVLPNGIDMENFHPQhtvkdfk------tqlgipENSQIITYCSRld 462 Clostridium bot...
NP_274709    127 LIQKNTDRFICVSRLVYDVqt---aDNPFKEKYRIVHNGIDTGRFPPSqek--------------pdSRFFTVAYAGRis 189 Neisseria menin...
YP_001635201 141 LLPARTARAVIVTNPEDETt-----LRAARVRPRLIPIGANIDPVLPEgydrsiw-----radlgvsDEMPLIAYFGLls 210 Chloroflexus
AAL94596     118 LIKAFGNYSIAVCENIKKHmi--ndIGFSENKVSVILNPVNYKKLDLEkk----------------vNDKKVISIVGRls 179 Fusobacterium n...
NP_925141    154 ERQILGDFDQILSCNSESTtfyrerYPRLAGRIHTFRYMLDTSLYHPPtpgeelaqrralaaqmglePETRFLLFAGRlh 233 Gloeobacter vio...
Feature 1                                                                                       #
YP_074927    196 d----efADTAVALLQALPRLneq-------fptIRLWILGDGNRYAEVarlad----evnrrLGREAARAVGh--RLDV 258 Symbiobacterium...
EDP63985     236 ------rWKGHDLLVQALSRLqr---------gsFHCLMVGEDGGRRSVkaalep---viaklGLTPHVHFVGr--TDDM 295 alpha proteobac...
CAP55388     215 ------pWKGQALLLEALARMeaqeqarggsgrdWACVFVGPARRRDRFarsltq--maetqpALRGRVYFAGl--CADM 284 Gluconacetobact...
AAY61398     215 ------sWKGHLVLVEALSKLkh---------rdFYCLMVGDISRHPNFtnrvke---liatlKLQNKIQIFGn--DSDI 274 Rickettsia feli...
AAR27963     181 ------gPKGELCYRLLDEVLdld--------acQVKVVSGSQLPERFV--------------RFRDRVDFVGy--VEDV 230 Aeromonas hydro...
YP_001387892 463 wgktfaaEAFIFACFTLMAKNk-----------hLHAFVIGDGADKNLIthevn----ilnkmLKRDAIHVVGa--KFDV 525 Clostridium bot...
NP_274709    190 ------pEKGLENLIEACVILhrk-------ypqIRLKLAGDGHPDYMCrlkrd-----vsasGAEPFVSFEGf--TEKL 249 Neisseria menin...
YP_001635201 211 ------pGKGIDLLIDLIADQp-----------aWRLLIIGGAATSPTDrvyaktiqqrletlSLRDRVIITGhiaAERV 273 Chloroflexus
AAL94596     180 ------gPKGDVAYDLLEILSqdel-----lskyKVCLIGGKELPERFLk-------------FKKKYIEFIGy-vPNIQ 234 Fusobacterium n...
NP_925141    234 ------aQKDPLLLLRAVQELde---------pgVHLLMAGAGELETEIrrtv-------galGLADRVSLLGpvpRERM 291 Gloeobacter vio...
Feature 1                                   #                                                    
YP_074927    259 PAFFnlADCVVAVA--------RTATEAMLCERPVIIAGEG-----GYRGILTPErip------lyaGSNFTAREGGTPL 319 Symbiobacterium...
EDP63985     296 PAAYklADVVVSASldpe-pfgRVMIEAQAMGRPIVATDHG-----GARETVLPGe-----------TGWLVKPNDADAL 358 alpha proteobac...
CAP55388     285 PAALalADVVVMPSlrpe-pfgRVVIEAQAMARPVIVAAHG-----AAMETVAHGq-----------TGLLVPPGDASAL 347 Gluconacetobact...
AAY61398     275 INLYgiSDIIVSASiepe-afgRTIIEGQAMEKLVIATNIG-----GAVETINNN------------ITGFHVEPNNAEA 336 Rickettsia feli...
AAR27963     231 PALMaqCDLVIGAG--------RVAMEALLCGRPAFAIGEA-----KAIGLVTGQn----------lDEALASNFGDIGP 287 Aeromonas hydro...
YP_001387892 526 LPYYqnADIVVGTA--------RVALEAMSCGKPVIAVGNH-----GYTGIINPRcm---------nEQWNMYFGDHDSI 583 Clostridium bot...
NP_274709    250 ASFYrqSDVVVLPSlvpe-afgLSLCEAMYCRTAVISNTLG-----AQKEIVEHHq-----------SGILLDRLTPESL 312 Neisseria menin...
YP_001635201 274 SAYLhaCDLIVLPFrdgaslrrGSLLAALAHGCAVITTPPAspataAALTGVVHFaaahpeslktaiISLLSNPNARLRL 353 Chloroflexus
AAL94596     235 EKIFe-SDIVIGAG--------RVAFESLLNKTALIAVGET-----EYIGFVNKEnl---------dKSLASNFGDIGSM 291 Fusobacterium n...
NP_925141    292 AVLHraSTLVVLSSvye--glpLVVLEALSSGKPVVSTASG-----DTPRILVSG------------SGLISRERTPTAL 352 Gloeobacter vio...
Feature 1                                                                                 
YP_074927    320 NPAVlaadi------agllAPGNEAERQRLg--------------------------------rAGREFVVAS 354 Symbiobacterium thermo...
EDP63985     359 AQGIkaal--------gldAEGRERLSARAv--------------------------------eHVRENFSRY 391 alpha proteobacterium ...
CAP55388     348 AGAIravl--------dmaPEDAAALGAAAr--------------------------------aSVQASYTTA 380 Gluconacetobacter diaz...
AAY61398     337 LAEKidycf------silgTDTAKKIQEAAr---------------------------------HTVINNFSL 370 Rickettsia felis URRWX...
AAR27963     288 RDLAi--------------DFAALKTQIAPalssgsvfdvirqriqaeyglagvvsglesiyqdAVVETLRRE 346 Aeromonas hydrophila
YP_001387892 584 KKADplal-------ekdlNGLLQDTEACKslgk---------------------------wgrRWCEEKFDN 622 Clostridium botulinum ...
NP_274709    313 ADEIerl---------vlnPETKNALATAAh---------------------------------QCVAARFTI 343 Neisseria meningitidis
YP_001635201 354 SEAAr-------------qAARRFDWQNIA----------------------------------AAHLELYRS 379 Chloroflexus
AAL94596     292 KYPKiekeillndikkalnLSENEKEELKDi---------------------------------IFKETNLQN 331 Fusobacterium nucleatu...
NP_925141    353 ADALrtvlh-----hpsafPAERCLEAARPyqartvv---------------------gelaneMLARFQTRR 399 Gloeobacter violaceus

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