Conserved Protein Domain Family
GT1_AmsK_like

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cd04946: GT1_AmsK_like 
This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Statistics
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PSSM-Id: 99997
View PSSM: cd04946
Aligned: 12 rows
Threshold Bit Score: 468.351
Threshold Setting Gi: 156858321
Created: 21-Feb-2007
Updated: 17-Jan-2013
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20559760    3 SILILTNAfp--yYPGEQFIEDEIAFWAEsSFSEVYILPatcgkdrrwlpe-----------nitlstpiqeksRLNLIF 69
gi 88603619    4 NLILITDTyp-fgAVAESFLDKEIPYLSS-FFNSIIIVPrnfpaeiekverkmpd---nvvidtsllkyftnkkIKRILF 78
gi 152991694   3 EIILITSSfp--yYPGEQFLETEVEYYPK-RANLTIMPItahpkyrnvpngikv------dqflckksvtlvdkLYYLIK 73
gi 156858329   5 ALVLITNSfp--fGKGETFVDNEIRYYSK-FYPVYVVSIdnvcpqrflnipn----------nisiyqmpklsrCNKIIW 71
gi 72396794   11 ILVLITFSyp-ygAIRESFLDPEISCLCS-YFNKIILVPqylpdatekiarnlpkvcvlddsliiyskigkirsVLMKIF 88
gi 30023301    4 CLILLTNYyp--fHKGEEYLESEIEYLSK-SYKKIYIIStmvsnemqqtrtvpe-----nvvilpigikhsiagKAKMVL 75
gi 150019436   4 CLVLLTKVfp--fDKGEEFIEGEIKMLSE-AFEKVIVIAtsvaddaiqtr-------------sipsnfevhkiKASKIK 67
gi 146295262   2 NLILLTIGyp--hPKRDVFVGNEIDFLCK-AFDTIYILPvqagkilpkklkngdk----yklhekvkvwdvehtIKDVLF 74
gi 156858321   3 TVYLFTNTfp-ygINSETFIEEEMRVAGN-LGLHIVVLPlhrkkvcrcvps-----------nveicnsladtsFIKKIY 69
gi 150008826   3 SLLFFTDTfplsgLTEPSFILPEIQVMDK-SFDRITILPenkasngekvnlpe-------kfcidqtfcnqdlsCNNLIL 74
gi 33594863    5 RIALITNGypdiyARERSFILPELKALLA-YGHQVTLVPvrevtevdpdlpdgv-----averqlahlyrpwqlPATVLW 78
gi 50841619    7 TLILLTNTyp--lSRGEEFLENEIDHVGR-AFDQVVIIPiqagpadvqtraip--------snaqvmhiarsspRGLDRA 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20559760   70 Ral------iSAVFIKEIRCLIKare--------fsFLKLYYALKASALtksselalr----qfvsnngkIDVVYCYWND 131
gi 88603619   79 Ikii----vgSILFYKEILKRPKiffdiralkktiyYLLSAYLVKNWVLnflkqn----------nsnlsQTLFYTYWLG 144
gi 152991694  74 Sm-------gTRLFYKEFRTQVGtntk-----rikqFLFSMYTYQRFYElfdvyfh--------kkeklnSTVVYTYWNT 133
gi 156858329  72 Ylrs----llRQVFYEELLFLLKer---------nyFFSRLHSLIAFIGlgervfiflt-knisnkieghDTVCYSYWLH 137
gi 72396794   89 Lcl------rSKLFYTEIIKKPAiitn------iksFKLLGEFISDAFIikkwasnci----kkhdfapqNTIFYTYWLS 152
gi 30023301   76 Rqfst-inkdKLKTKMIKADSKGkl---------shKLYCYYFESRAMDvydrvehql---neydfeqydSITVYSYWLY 142
gi 150019436  68 Hslpi-savkLFPFYNYNGCVDKeernai--sgsikKKAYLTYFTAKANsvlkevleii--kkynmdeysGITLYSYWLY 142
gi 146295262  75 IsprliglaiKEAFKAVFQKSTIr-----------yKILYLWMIFRWIFltsitlknlsklfeeegidpnDTVLYSYWFH 143
gi 156858321  70 Iacl---mlfSLHFWKMLWIKDRprspne--fyqgiKYLYGSFWISSFLsshky------------ifkqGSVFYSYWFN 132
gi 150008826  75 Lrh------lFKPFVLQLLFKEKkrik-----nryqFFSFLRYINKALFykayinrll----ingeidsqNTVFYSFWFS 139
gi 33594863   79 Mm-------fRGYFWREAWQCLGrg----------rLRYLGHFFKESVRatntlrm--------qsalrdYDVLYTYWFK 133
gi 50841619   76 Laavk-glvrLPPSGVDWAATRRqprll---vsdahFEACAQTALDSILaklpnl---------rltsesHVTIYSFWLH 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20559760  132 VQAYAsc--llKQEGLIg------kVISRAHGFDLYEERRAHGYMPlkrqf-vdcfdAVFLLSEQGRNYYQERYSAADek 202
gi 88603619  145 SSTMGvn--lvKKDNNLi------kVISRAHRYDIYEDLYIPKYLPfrnes--msinRIFCISNHGMKYIINHYPFLKsi 214
gi 152991694 134 EATYAlq--slKKKYGYk-------LVSRIHGMDLYQERRKDGYMPlkhlf-thnidKVFTITESANTYLNTTYGFSHei 203
gi 156858329 138 HGAYAav--rfKKKFSAr-------AVARCHGYDLYADRYISNYLPlrfyl-ssyldVIFPISKHGLDYLKGNIFISKsc 207
gi 72396794  153 ASTLGlg--llKEEYPDi------vVISRAHRGDLYEDQYSSAHITlrnet-fslisKVFLISNSGKEYLEKKYPTYLek 223
gi 30023301  143 ITARVav--elKHKYFKern---pyTISRAHRYDLYEDAAPLKYLPerdyl-lksldAVYPCSQDGVDALNQTYPAYKdk 216
gi 150019436 143 DIAFVai--klKELYGKki----trVVSRTHRYDLYANENSMNYIPlryyf-lrnldAVYPCSDDGSNYLKKLYPDYSdk 215
gi 146295262 144 FLALSia--lfKKPVLL--------KISKAHGSDLYSELFPQPCKEfiin----hidKVFACSKMGAEYINKRYNTDKav 209
gi 156858321 133 HTPLGlgwrikKDEYYRdf-----vLYTRAHRYDVYERQIGSYIPYrkeal--aylkGVFCVAKEGKIFLQKCYPNYAek 205
gi 150008826 140 EITFAla--mlCDKYHLt-------FSCRAHGYDLYDERVVFRSHAirayt-lskilHVYPCSEQGWNYMKKQYPTYNek 209
gi 33594863  134 GESTGis--lmPGTHAR--------RLTRAHGYDLYEDRPNNEGYIpyremtlprldRVVVLSEEARAYLEQRYPASVgr 203
gi 50841619  143 ITARTat---lLAEQLRaqgvtvdrVISRAHRYDLYPSVAPRHHIPerrll-lqsldGICPVSEQGTRELQTTWPQYAgk 218
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20559760  203 l-kiSKLGVPIPKggsk---vseEGLHLVSLSScipIKRIDKIISTVRLLalehrsikiKWTHLGGGALKLDLeslarte 278
gi 88603619  215 c-siSYLGVEKPDfisq--psfdSIFRIVSCSYivpVKRIHLIILALKEFakkrpelkiKWTHIGYGRLFDQIkkeat-- 289
gi 152991694 204 l-kvYRLGVNDYGiyck--pgpdHVLSIVSCSFlvkVKRVDKIIDALHALanrfhavtfIWNHIGSGPLEKTLkdlankk 280
gi 156858329 208 klevSRLGTFDYGiksn--vhleGTLRLVSCSWivpVKRVHRILETLQQIvdi----niEWTHIGGGALKERLeldie-- 279
gi 72396794  224 y-qtIRLGVTDSHfits--psvdGIFRIVSCSYivpVKRLHLLINGLKEFcilrpskriEWTHIGYGPLEQSIkklas-- 298
gi 30023301  217 v-svERLGTISTNvlsn---tmnDQLYIVSCSVvrkVKRIDLLIEALVKLeekd--iqySWTHIGGGPEFERIkklak-- 288
gi 150019436 216 i-ktAYLGTKDYGtsqg---skdSTYRIVSCCHvspVKRIDLLAKSLATLkdsg--lnlKWTHFGAGDGLDPIkeysr-- 287
gi 146295262 210 ---vSYLGTFNDYeinln-kkrsRPFKIVSCARvvpVKRVEKIVDSLEKIegy----kiLWTHIGDGELFESLkeyaqrk 281
gi 156858321 206 i-flSHLGVSTKEqynkk-vkkvADISFISCSSltaVKRVDFIFKRINSFcvahpqlciSWTHIGGGPLLRELqalie-- 281
gi 150008826 210 i-svSYLGCEKIYntfnptsedhKTITFFTCARlhsVKRLPMTYNILADVakyfkdihvCWQIIGEGDERSKLetliv-- 286
gi 33594863  204 t-vvSPLGVAHESdenp--gpeaDRIVLVSCSYptpNKRLPLIGQLAAAVacarpsvkvVWMHFGCRREEAGLpvdf--- 277
gi 50841619  219 i-htRYLGTSDPGptah---crrDPFTIVSCAHlvpVKRMIRMPAILARVrasg--idaRWTHLGDGPQMDTLreevt-- 290
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 20559760  279 lgeleNVSFHFMGEVenKEAKAFFLnnaVDFFINASESEGVPVSIMEAMSaGVPAIAPCVGGIRSLIDns-cGRLLse-- 355
gi 88603619  290 sllsnNIIANFTGYLsdNLFYNFYKtnpIDVFINVSASEGIPVSIMEAQSfGIPVIATAVGGTPEIVTed-vGILLse-- 366
gi 152991694 281 lsqkeNIIFNFIGQLtnQEVYKFYKenkVDVLINVSESEGVPVSIMEAMScHIPIIAPNIGGISEMIDnkvnGVLLne-- 358
gi 156858329 280 -klpkNIKVNLLGELtsTDIYKLYKensYHIFVNVSESEGIPVSIMEASSfGIPVIATNVGGVGEIVEngynGLLLnk-- 356
gi 72396794  299 evlpeNVKYNFTGFLpdKGVIEYYRqhnVDVFINVSASEGIPVSIMEAQScGIPVIATDVGGTHEIVSde-vGLLLds-- 375
gi 30023301  289 -sklnMKQVKFTGFVknQEVLNWYKenpATVFVNLSASEGVPVAIMEAISmGLPVIATDVGGTREIVEngknGYLLdk-- 365
gi 150019436 288 -enldFMETNFPGSVknSELMEYYKnesVDLFINTSSSEGLPVSIMEACSfSIPTIATNVGGTAEIVKegetGLLLdk-- 364
gi 146295262 282 lskkeNITYNFMGFLpnSKILDLYAkedFNLFVNTSSSEGLPVSIMEAMSfGIPVVATDVGGVREIVKdgsnGYLLek-- 359
gi 156858321 282 -nkskNLNVILTGYIsnSDVKQLYMmndFDLFVNMSLSEGIPVSIMEAISfGIPIIATNVGGNAEIVNdetgVLIPvnid 360
gi 150008826 287 qnhvpNFTVSLCGAKsnEEVHKIYSkkhIDWGILLSESEGLSISVCEQLAyKIPVIVTNVGGLPEVVDes-nGILLsp-- 363
gi 33594863  278 -agppNLSVQFAGEApnEHIRRWYAtrpVSFFVNLSQSEGQPVSIMEAMAfGIPVMATGVGGIPEMLRhgggMTLPeq-- 354
gi 50841619  291 -vhrvTDAVTLLGHVdnTQVMATQRdlkPSVFVNLSSSEGLPVSMMEVASlGIPIIATGVGGVGEIVSsd-nGHLLpa-- 366
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*...
gi 20559760  356 npTPEEYCSSISklyl--ggdRKTMRETARKKIEKDFSSEQNYRSFIK 401
gi 88603619  367 npSPEEIANAIEffid-npeiTKRMRLKSIENWEKNFNAVKNFTEFAK 413
gi 152991694 359 kcEVNEIVDSLGnih---ffkSEVVREKSHSIFLKKYNAQTNYNNFIN 403
gi 156858329 357 dfLNRDLSVCLKsiacmvdndYQTLRKHAREMWEERYNSSVNYSKFVR 404
gi 72396794  376 dpTPMDIADAILkfid-npnqIADKKRKSKENWRLNYNAEVNHNFFAQ 422
gi 30023301  366 dcTVSQIVESLNefhimdngsYKKMCDNALNIWKERSNAKVLYSKFAT 413
gi 150019436 365 dfDPEELGNKIKymaeiseeeKQKFRDRCRLLWTENFCADSNFRKFAH 412
gi 146295262 360 dfTEDELSSLIEkfiqmpegeYQRFCTEARKTWEERFNAKKTYEEFVS 407
gi 156858321 361 qaAFNETVSDIMn-------kMDILKISTILCYQNEFNADKNYHCFYN 401
gi 150008826 364 epTSNELISKLTkyin-naelYDTICNNAYNKWSNNYNSNKNRVEFMK 410
gi 33594863  355 pdVNAVAREMLSlldd--psrYQAMREAARETQLAYFNTSANHRTLAD 400
gi 50841619  367 efTDAQASDALVqlarlsedeYQQVCQASRQVWEEKFRASVVYPEFCR 414
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