1F1V,1F1X


Conserved Protein Domain Family
HPCD_C_class_II

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cd07256: HPCD_C_class_II 
Click on image for an interactive view with Cn3D
C-terminal domain of 3,4-dihydroxyphenylacetate 2,3-dioxygenase (HPCD)
This subfamily contains the C-terminal, catalytic, domain of HPCD. HPCD catalyses the second step in the degradation of 4-hydroxyphenylacetate to succinate and pyruvate. The aromatic ring of 4-hydroxyphenylacetate is opened by this dioxygenase to yield the 3,4-diol product, 2-hydroxy-5-carboxymethylmuconate semialdehyde. HPCD is a homotetramer and each monomer contains two structurally homologous barrel-shaped domains at the N- and C-terminus. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism. Most extradiol dioxygenases contain Fe(II) in their active site, but HPCD can be activated by either Mn(II) or Fe(II). These enzymes belong to the type I class II family of extradiol dioxygenases. The class III 3,4-dihydroxyphenylacetate 2,3-dioxygenases belong to a different superfamily.
Statistics
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PSSM-Id: 319919
Aligned: 5 rows
Threshold Bit Score: 270.527
Created: 18-Mar-2009
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 14 residues -Click on image for an interactive view with Cn3D
Feature 1:active site [active site]
Evidence:
  • Structure:1F1V_A; active site of Arthrobacter globiformis 3,4-dihydroxyphenylacetate 2,3-dioxygenase complexed with substrate 3,4-dihydroxyphenylacetate and Mn(II), by 4A distance.
    View structure with Cn3D
  • Citation:PMID 9047314

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          # #                                    #       #             #             
1F1V_A    150 LVRLDHFNQVTpDVPRGRAYLED-LGFRVSEDIKDs-DGVTYAAWMHRKQTVHDTALTGGNGPRMHHVAFATHEKHNIIQ 227 Arthrobacter globi...
1F1X_A    150 LVRLDHFNQVTpDVPRGRKYLED-LGFRVTEDIQDd-EGTTYAAWMHRKGTVHDTALTGGNGPRLHHVAFSTHEKHNIIQ 227 Brevibacterium fuscum
EDZ43093  147 PLRIDHFNCFSnDVDASVEFYSD-FGFRVTEYTEDdeSKKIWAAWMHRKGGVHDMAFTNGTGPRMHHVAFWVPTPLNIID 225 Rhodobacterales ba...
NP_285547 155 LQRVDHCNVRVpDVKATLDWYGAeLGFRVSEYTVDe-QEQYWAAWIQRRGGVHDFALTNGAGPCLHHWAYWMPDAMSIIK 233 Deinococcus radiod...
BAD08313  147 PLRIDHVNLRVaNVDYALRYWRDeLNFSVSEYVER--DGETFAAWTRRFPGTHDVALVKANGPSLHHIAYTVQGPAEIIR 224 Bacillus sp. JF8
Feature 1                    #    # ##     #         # #                       #            # 
1F1V_A    228 ICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDYYTgdpdnPTITWDVHDNQRRd--WWGNPVVPSWY 305 Arthrobacter globi...
1F1X_A    228 ICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDNHRIEIYTQDYYTgdpdnPTITWNVHDNQRRd--WWGNPVVPSWY 305 Brevibacterium fuscum
EDZ43093  226 LLDLMATTGYVDNIERGPGRHGISNAFFLYVLDPDGHRIEIYCSDYQTvdpdlEPIKWDLQDPQRQt--LWGAAAPRSWF 303 Rhodobacterales ba...
NP_285547 234 TCDILAGARMPERIERGPGRHGVSNAFFLYIRDPDGHRIELYTSDYITvdpdfEPIRWLRDDPRRQt--LWGAKTPRSWF 311 Deinococcus radiod...
BAD08313  225 TADLLADAGYQDAIEFGPGRHGLSNAFFLYIRDPDGNRMEIYTGDYLRdl-dmPPIKWTWEEYDQKgrlWWGPSYPERFL 303 Bacillus sp. JF8
Feature 1         
1F1V_A    306 TEAS 309 Arthrobacter globiformis
1F1X_A    306 TEAS 309 Brevibacterium fuscum
EDZ43093  304 EHGT 307 Rhodobacterales bacterium HTCC2083
NP_285547 312 EDAS 315 Deinococcus radiodurans R1
BAD08313  304 ETSP 307 Bacillus sp. JF8

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