1HXM,1YPZ,4LFH


Conserved Protein Domain Family
IgC_TCR_delta

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cd07687: IgC_TCR_delta 
Click on image for an interactive view with Cn3D
Immunoglobulin (Ig) constant domain of the delta chain of delta/gamma T-cell antigen receptors (TCRs)
The members here are composed of the constant domain of the delta chain of delta/gamma T-cell antigen receptors (TCRs). TCRs mediate antigen recognition by T lymphocytes, and are composed of alpha and beta, or gamma and delta, polypeptide chains with variable (V) and constant (C) regions. The majority of T cells contain alpha-beta TCRs, but a small subset contain gamma-delta TCRs. Alpha-beta TCRs recognize antigen as peptide fragments presented by major histocompatibility complex (MHC) molecules. Gamma-delta TCRs recognize intact protein antigens; they recognize protein antigens directly and without antigen processing and MHC independently of the bound peptide. Gamma-delta T cells can also be stimulated by non-peptide antigens such as small phosphate- or amine-containing compounds.
Statistics
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PSSM-Id: 409484
Aligned: 8 rows
Threshold Bit Score: 116.062
Created: 7-Jun-2009
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
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Conserved site includes 18 residues -Click on image for an interactive view with Cn3D
Feature 1:heterodimer interface [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1         ####           # # # #                                #### # ##             
1HXM_A    126 KPSVFVMKNg--------TNVACLVKEFYPKDIRINLVSSKKITEfd-pAIVISPSGKYNAVKLGKYed-snSVTCSVQH 195 human
1YPZ_E    125 KPSVFIMKNg--------TNVACLVKDFYPKEVTISLRSSKKIVEfd-pAIVISPSGKYSAVKLGQYgd-snSVTCSVQH 194 house mouse
4LFH_D    126 KPSVFVMKNg--------TNVACLVKEFYPKDIRINLVSSKKITEfd-pAIVISPSGKYNAVKLGKYed-snSVTCSVQH 195 human
BAA14409   78 SPSVFVMKNg--------TNVACLVKEFYPKDVTISLQSSKKIIEyd-pAIAISPGGKYSAVKLGQYgd-pdSVTCSVEH 147 cattle
AAD51740  150 IPEVIVMKSkkhkedgdtGKAACLARNFYKKNISLEMSSNEVVYEp--kAPIVTSNGMYNTIKVVKVtk-qsEVTCTARL 226 chicken
CAC14674  107 SPSVFVMKNg--------TNVACLVKEFYPKEVTISLQSSKKIIEye-pAIVVSPGGRYSAVKLGQYnd-pdSVTCSVEH 176 sheep
AAP72021  144 TPSVFVMKNg--------TNVACLVKDFYPKSVDIHLPPEGKVIE----GVVTTANGKFSAVKLGQYkqdleQVKCTVKH 211 tammar wallaby
ABB17347  139 SPSLFLVRNk--------NSVACLIRNFYPKELNVSLASSGTLISaqdvSLAPMPNGTYSAVQIGKVge-ndPVTCSVNH 209 Isoodon macrourus
Feature 1               ###
1HXM_A    196 d---nKTVHSTDF 205 human
1YPZ_E    195 n---sETVHSTDF 204 house mouse
4LFH_D    196 d---nKTVHSTDF 205 human
BAA14409  148 n---kQTWHSTDF 157 cattle
AAD51740  227 sn-gnFTANSTTP 238 chicken
CAC14674  177 n---kKTWHSSDF 186 sheep
AAP72021  212 n---nNTVEAFYK 221 tammar wallaby
ABB17347  210 sgkkiHVSHWPDY 222 Isoodon macrourus

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