Conserved Protein Domain Family
7tmA_tmt_opsin

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cd15086: 7tmA_tmt_opsin 
teleost multiple tissue (tmt) opsin, member of the class A family of seven-transmembrane G protein-coupled receptors
Teleost multiple tissue (tmt) opsins are homologs of encephalopsin. Mouse encephalopsin (or panopsin) is highly expressed in the brain and testes, whereas the teleost homologs are localized to multiple tissues. The exact functions of the encephalopsins and tmt-opsins are unknown. The vertebrate non-visual opsin family includes pinopsins, parapinopsin, VA (vertebrate ancient) opsins, and parietopsins. These non-visual opsins are expressed in various extra-retinal tissues and/or in non-rod, non-cone retinal cells. They are thought to be involved in light-dependent physiological functions such as photo-entrainment of circadian rhythm, photoperiodicity and body color change. Tmt opsins belong to the class A of the G protein-coupled receptors and show strong homology to the vertebrate visual opsins.
Statistics
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PSSM-Id: 320214
Aligned: 7 rows
Threshold Bit Score: 420.298
Created: 17-Nov-2008
Updated: 25-Oct-2021
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                   #   #
NP_001027778  40 LVVSVFLGFIGTFGLVNNLLVLVLFCRYKMlrspINLLLMNISISDLLVCVLGTPFSFAASTQGRWLIGeagCVWYGFAN 119 torafugu
XP_686747     79 TVTAVCLGAILLLGCLNNLFVLLVFARFRTlwtpINLILLNISVSDILVCLFGTPFSFASSLYGKWLLGhhgCKWYGFAN 158 zebrafish
NP_001112371  41 ILVAVSLGFIGTFGFLNNLLVLVLFGRYKVlrspINFLLVNICLSDLLVCVLGTPFSFAASTQGRWLIGdtgCVWYGFAN 120 zebrafish
CAG09827       3 TAVAVLLGVILVAGILSNSLVLLLFVKYRSlwtpINLILLNINLSDILVCVFGTPFSFAASLQGRWLIGeggCMWYGFAN 82  spotted green p...
AGK25001      30 TVVAVFLGFILFFGFLNNLIVLILFCKFKTlrnpVNMLLLNISISDMLVCISGTTLSFASNIHGKWIGGehgCRWYGFVN 109 chicken
AGK25002      32 TIVAVFLGIILIFGSISNFIVLVLFCKFKVlrnpVNMLLLNISISDMLVCLSGTTLSFASSIQGRWIGGkhgCRWYGFAN 111 gray short-tail...
XP_002933418  53 LLVAVFLGVIGSLGFFNNLVVLILFCQYKVlrspINMLLMNISLSDLMVCILGTPFSFAASTQGHWLIGeigCIWYGFVN 132 western clawed ...
Feature 1        #  ##                                                               ####        
NP_001027778 120 SLFGVVSLISLAVLSFERYSTMMTPteaDPSNYCKVCLGITLSWVYSLVWTVPPLFGWSSYGPEgpgTTCSVNWtakttn 199 torafugu
XP_686747    159 SLFGIVSLMSLSILSYERYAALLRAtkaDVSDFRRAWLCVAGSWLYSLLWTLPPFLGWSNYGPEgpgTTCSVQWhlrsts 238 zebrafish
NP_001112371 121 SLLGIVSLISLAVLSYERYCTMMGSteaDATNYKKVIGGVLMSWIYSLIWTLPPLFGWSRYGPEgpgTTCSVDWttktan 200 zebrafish
CAG09827      83 SLFGIVSLVSLSVLSYERCTVVLQPsqvDVSDFRKARFCVGGSWLYALLWTSPPLLGWSSYGPEgagTTCSVQWqlrspa 162 spotted green p...
AGK25001     110 SCFGIVSLISLAVLSYERYSTLTLCn-kRSDDYRKALLAVGGSWVYSLLWTVPPLLGWSSYGIEgagTSCSVRWssetae 188 chicken
AGK25002     112 SCFGIVSLISLAILSYERYRTLTLCp-gQGADYQKALLAVAGSWLYSLVWTVPPLIGWSSYGTEgagTSCSVHWtsksve 190 gray short-tail...
XP_002933418 133 TLFGTVSLVSLAVLSYERYCTMLRSteaDLTNYKKAWLGILVSWIYSLVWTLPPLFGWSKYGPEgpgTTCSVNWhsrdan 212 western clawed ...
Feature 1               ##   #                                                  #   #            
NP_001027778 200 SISYIICLFVFCLIVPFLVIVFCYGKLLCAIRqvsginastsrKREQRVLCMVVIMVICYLLCWLPYGVVALLATFGppd 279 torafugu
XP_686747    239 SISYVMCLFIFCLLLPLVLMIFCYGKILLLIKgvtkinlltaqRRENHILLMVVTMVSCYLLCWMPYGVVALLATFGrtg 318 zebrafish
NP_001112371 201 NISYIICLFIFCLIVPFLVIIFCYGKLLHAIKqvssvntsvsrKREHRVLLMVITMVVFYLLCWLPYGIMALLATFGapg 280 zebrafish
CAG09827     163 SVSYVLCLLVFCLLLPFLVMVYSYGRILVAIRrvgrinqltaqRREQHILLMVLSMVSCYMLCWMPYGIMALVATFGklg 242 spotted green p...
AGK25001     189 STSYIICLFIFCLVIPVMVMMYCYGRLLYAVKqvgkihkntarKREYHVLFMVITTVICYLVCWIPYGVIALLATFGkpg 268 chicken
AGK25002     191 SVSYIMCLFIFCLVIPILVMVYFYGRLLYAVKqvgkirktaarKREYHVLFMVVTAVICYLICWVPYGMIALLATFGppg 270 gray short-tail...
XP_002933418 213 NISYIVCLFIFCLALPFAVIVYCYGRLLFAIKqvsgvsksssrAREQRVLIMVIVMVVCFLLCWLPYGVMALVATFGkpg 292 western clawed ...
Feature 1                  #   #                     
NP_001027778 280 lvTPEASIIPSVLAKSSTVINPIIYVFMNkQFYRCF 315 torafugu
XP_686747    319 liTPVTSIVPSVLAKSSTVVNPVIYVLFNnQFYRCF 354 zebrafish
NP_001112371 281 lvTAEASIVPSILAKSSTVINPVIYIFMNkQFYRCF 316 zebrafish
CAG09827     243 lvTPMVSVVPSILAKFSTVVNPIIYMFFNnQEKLSP 278 spotted green pufferfish
AGK25001     269 vvTPVASIIPSILAKSSTVCNPIIYILMNkQFYKCF 304 chicken
AGK25002     271 vvSPVANVVPSILAKSSTVCNPIIYVLMNkQFYKCF 306 gray short-tailed opossum
XP_002933418 293 iiSPSASIIPSVLAKSSTVYNPIIYIFLNkQFYRCF 328 western clawed frog

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